Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgb4Q6P8W9 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgb4Q6P8W9 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.83□□□□□ -0.04
Hmgb4Q6P8W9 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgb4Q6P8W9 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgb4Q6P8W9 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgb4Q6P8W9 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.83□□□□□ -0.04
Hmgb4Q6P8W9 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgb4Q6P8W9 Gm37230-201ENSMUST00000194491 818 ntBASIC14.83□□□□□ -0.04
Hmgb4Q6P8W9 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.83□□□□□ -0.04
Hmgb4Q6P8W9 Gm45453-201ENSMUST00000211758 853 ntBASIC14.83□□□□□ -0.04
Hmgb4Q6P8W9 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgb4Q6P8W9 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgb4Q6P8W9 Gm20445-201ENSMUST00000061905 565 ntBASIC14.83□□□□□ -0.04
Hmgb4Q6P8W9 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgb4Q6P8W9 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgb4Q6P8W9 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Hmgb4Q6P8W9 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgb4Q6P8W9 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Hmgb4Q6P8W9 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgb4Q6P8W9 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgb4Q6P8W9 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgb4Q6P8W9 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb4Q6P8W9 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb4Q6P8W9 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb4Q6P8W9 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb4Q6P8W9 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Hmgb4Q6P8W9 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb4Q6P8W9 Gm15653-201ENSMUST00000119247 907 ntBASIC14.82□□□□□ -0.04
Hmgb4Q6P8W9 Gm14928-201ENSMUST00000120198 477 ntBASIC14.82□□□□□ -0.04
Hmgb4Q6P8W9 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb4Q6P8W9 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.82□□□□□ -0.04
Hmgb4Q6P8W9 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.82□□□□□ -0.04
Hmgb4Q6P8W9 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.82□□□□□ -0.04
Hmgb4Q6P8W9 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb4Q6P8W9 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb4Q6P8W9 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb4Q6P8W9 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.82□□□□□ -0.04
Hmgb4Q6P8W9 Olfr286-202ENSMUST00000205305 969 ntBASIC14.82□□□□□ -0.04
Hmgb4Q6P8W9 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.82□□□□□ -0.04
Hmgb4Q6P8W9 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb4Q6P8W9 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Hmgb4Q6P8W9 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.82□□□□□ -0.04
Hmgb4Q6P8W9 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.82□□□□□ -0.04
Hmgb4Q6P8W9 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb4Q6P8W9 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb4Q6P8W9 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb4Q6P8W9 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb4Q6P8W9 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Hmgb4Q6P8W9 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Hmgb4Q6P8W9 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb4Q6P8W9 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb4Q6P8W9 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb4Q6P8W9 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb4Q6P8W9 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Hmgb4Q6P8W9 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgb4Q6P8W9 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.81□□□□□ -0.04
Hmgb4Q6P8W9 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Hmgb4Q6P8W9 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb4Q6P8W9 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb4Q6P8W9 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb4Q6P8W9 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb4Q6P8W9 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb4Q6P8W9 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
Hmgb4Q6P8W9 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb4Q6P8W9 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb4Q6P8W9 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb4Q6P8W9 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Hmgb4Q6P8W9 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb4Q6P8W9 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb4Q6P8W9 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb4Q6P8W9 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb4Q6P8W9 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.81□□□□□ -0.04
Hmgb4Q6P8W9 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb4Q6P8W9 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb4Q6P8W9 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb4Q6P8W9 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb4Q6P8W9 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb4Q6P8W9 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.81□□□□□ -0.04
Hmgb4Q6P8W9 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb4Q6P8W9 Gm9794-201ENSMUST00000202370 423 ntBASIC14.81□□□□□ -0.04
Hmgb4Q6P8W9 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb4Q6P8W9 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Hmgb4Q6P8W9 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Hmgb4Q6P8W9 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb4Q6P8W9 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Hmgb4Q6P8W9 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb4Q6P8W9 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.81□□□□□ -0.04
Hmgb4Q6P8W9 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb4Q6P8W9 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb4Q6P8W9 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb4Q6P8W9 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb4Q6P8W9 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgb4Q6P8W9 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb4Q6P8W9 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb4Q6P8W9 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Hmgb4Q6P8W9 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb4Q6P8W9 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb4Q6P8W9 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hmgb4Q6P8W9 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms