Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
Foxc1Q61572 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC10.5□□□□□ -0.73
Foxc1Q61572 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Gm6973-201ENSMUST00000117080 721 ntBASIC10.5□□□□□ -0.73
Foxc1Q61572 Gm18889-201ENSMUST00000174284 929 ntBASIC10.5□□□□□ -0.73
Foxc1Q61572 Gm25948-201ENSMUST00000175334 112 ntBASIC10.5□□□□□ -0.73
Foxc1Q61572 Mir6990-201ENSMUST00000183724 91 ntBASIC10.5□□□□□ -0.73
Foxc1Q61572 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC10.5□□□□□ -0.73
Foxc1Q61572 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Foxc1Q61572 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Foxc1Q61572 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC10.5□□□□□ -0.73
Foxc1Q61572 AC131187.1-201ENSMUST00000224567 809 ntBASIC10.5□□□□□ -0.73
Foxc1Q61572 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Foxc1Q61572 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Foxc1Q61572 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC10.5□□□□□ -0.73
Foxc1Q61572 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Foxc1Q61572 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC10.5□□□□□ -0.73
Foxc1Q61572 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
Foxc1Q61572 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Foxc1Q61572 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Foxc1Q61572 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Foxc1Q61572 AC164107.1-201ENSMUST00000227730 2161 ntBASIC10.49□□□□□ -0.73
Foxc1Q61572 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
Foxc1Q61572 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Foxc1Q61572 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Foxc1Q61572 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Foxc1Q61572 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Foxc1Q61572 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Foxc1Q61572 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Foxc1Q61572 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Foxc1Q61572 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Foxc1Q61572 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Foxc1Q61572 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Foxc1Q61572 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC10.49□□□□□ -0.73
Foxc1Q61572 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Foxc1Q61572 Gm43474-201ENSMUST00000196415 774 ntBASIC10.49□□□□□ -0.73
Foxc1Q61572 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Foxc1Q61572 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Foxc1Q61572 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Foxc1Q61572 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Foxc1Q61572 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Foxc1Q61572 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Foxc1Q61572 AC148324.1-201ENSMUST00000219034 4240 ntBASIC10.49□□□□□ -0.73
Foxc1Q61572 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Foxc1Q61572 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC10.49□□□□□ -0.73
Foxc1Q61572 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC10.49□□□□□ -0.73
Foxc1Q61572 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Foxc1Q61572 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Foxc1Q61572 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
Foxc1Q61572 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Foxc1Q61572 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Foxc1Q61572 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Foxc1Q61572 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Foxc1Q61572 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Foxc1Q61572 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Foxc1Q61572 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Foxc1Q61572 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Foxc1Q61572 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Foxc1Q61572 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Foxc1Q61572 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Foxc1Q61572 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms