Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vsx2Q61412 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vsx2Q61412 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Vsx2Q61412 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vsx2Q61412 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vsx2Q61412 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vsx2Q61412 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vsx2Q61412 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vsx2Q61412 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vsx2Q61412 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.81□□□□□ -0.2
Vsx2Q61412 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vsx2Q61412 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vsx2Q61412 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Vsx2Q61412 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vsx2Q61412 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vsx2Q61412 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vsx2Q61412 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vsx2Q61412 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vsx2Q61412 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vsx2Q61412 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vsx2Q61412 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vsx2Q61412 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vsx2Q61412 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vsx2Q61412 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Vsx2Q61412 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vsx2Q61412 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Vsx2Q61412 Gm13015-201ENSMUST00000118674 204 ntBASIC13.81□□□□□ -0.2
Vsx2Q61412 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.81□□□□□ -0.2
Vsx2Q61412 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Vsx2Q61412 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.81□□□□□ -0.2
Vsx2Q61412 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vsx2Q61412 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.81□□□□□ -0.2
Vsx2Q61412 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vsx2Q61412 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vsx2Q61412 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vsx2Q61412 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vsx2Q61412 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vsx2Q61412 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vsx2Q61412 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vsx2Q61412 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx2Q61412 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx2Q61412 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Vsx2Q61412 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx2Q61412 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx2Q61412 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.8□□□□□ -0.2
Vsx2Q61412 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx2Q61412 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx2Q61412 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx2Q61412 Gm15920-201ENSMUST00000118998 402 ntBASIC13.8□□□□□ -0.2
Vsx2Q61412 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.8□□□□□ -0.2
Vsx2Q61412 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx2Q61412 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.8□□□□□ -0.2
Vsx2Q61412 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.8□□□□□ -0.2
Vsx2Q61412 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.8□□□□□ -0.2
Vsx2Q61412 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx2Q61412 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx2Q61412 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx2Q61412 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx2Q61412 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.8□□□□□ -0.2
Vsx2Q61412 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx2Q61412 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx2Q61412 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx2Q61412 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.8□□□□□ -0.2
Vsx2Q61412 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx2Q61412 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx2Q61412 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx2Q61412 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx2Q61412 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx2Q61412 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx2Q61412 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Vsx2Q61412 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.8□□□□□ -0.2
Vsx2Q61412 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx2Q61412 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx2Q61412 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vsx2Q61412 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vsx2Q61412 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vsx2Q61412 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vsx2Q61412 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vsx2Q61412 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vsx2Q61412 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vsx2Q61412 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vsx2Q61412 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.79□□□□□ -0.2
Vsx2Q61412 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vsx2Q61412 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
Vsx2Q61412 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vsx2Q61412 Gm8410-201ENSMUST00000117225 605 ntBASIC13.79□□□□□ -0.2
Vsx2Q61412 Gm6415-201ENSMUST00000118488 348 ntBASIC13.79□□□□□ -0.2
Vsx2Q61412 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.79□□□□□ -0.2
Vsx2Q61412 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.79□□□□□ -0.2
Vsx2Q61412 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vsx2Q61412 Gm44872-201ENSMUST00000207864 420 ntBASIC13.79□□□□□ -0.2
Vsx2Q61412 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vsx2Q61412 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vsx2Q61412 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vsx2Q61412 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.79□□□□□ -0.2
Vsx2Q61412 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vsx2Q61412 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vsx2Q61412 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Vsx2Q61412 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vsx2Q61412 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms