Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Gm7293-201ENSMUST00000216682 1007 ntBASIC15.5■□□□□ 0.07
Col11a1Q61245 Nsd1-205ENSMUST00000224693 852 ntBASIC15.5■□□□□ 0.07
Col11a1Q61245 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col11a1Q61245 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Col11a1Q61245 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
Col11a1Q61245 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.49■□□□□ 0.07
Col11a1Q61245 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col11a1Q61245 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Col11a1Q61245 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col11a1Q61245 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col11a1Q61245 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col11a1Q61245 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.49■□□□□ 0.07
Col11a1Q61245 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col11a1Q61245 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col11a1Q61245 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col11a1Q61245 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col11a1Q61245 Gm6015-201ENSMUST00000217493 1586 ntBASIC15.49■□□□□ 0.07
Col11a1Q61245 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col11a1Q61245 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col11a1Q61245 Gm25668-201ENSMUST00000157700 129 ntBASIC15.49■□□□□ 0.07
Col11a1Q61245 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Col11a1Q61245 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Col11a1Q61245 Gm5896-201ENSMUST00000189662 1024 ntBASIC15.49■□□□□ 0.07
Col11a1Q61245 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC15.49■□□□□ 0.07
Col11a1Q61245 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC15.49■□□□□ 0.07
Col11a1Q61245 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col11a1Q61245 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC15.49■□□□□ 0.07
Col11a1Q61245 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Col11a1Q61245 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col11a1Q61245 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Col11a1Q61245 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC15.49■□□□□ 0.07
Col11a1Q61245 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col11a1Q61245 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Col11a1Q61245 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Col11a1Q61245 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col11a1Q61245 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col11a1Q61245 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col11a1Q61245 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col11a1Q61245 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col11a1Q61245 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col11a1Q61245 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Col11a1Q61245 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col11a1Q61245 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col11a1Q61245 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col11a1Q61245 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC15.48■□□□□ 0.07
Col11a1Q61245 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC15.48■□□□□ 0.07
Col11a1Q61245 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
Col11a1Q61245 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Col11a1Q61245 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
Col11a1Q61245 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Col11a1Q61245 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC15.48■□□□□ 0.07
Col11a1Q61245 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC15.48■□□□□ 0.07
Col11a1Q61245 Gm37489-201ENSMUST00000191883 159 ntBASIC15.48■□□□□ 0.07
Col11a1Q61245 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col11a1Q61245 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Col11a1Q61245 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col11a1Q61245 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Col11a1Q61245 Gm8337-201ENSMUST00000187358 1938 ntBASIC15.48■□□□□ 0.07
Col11a1Q61245 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col11a1Q61245 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col11a1Q61245 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col11a1Q61245 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col11a1Q61245 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col11a1Q61245 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col11a1Q61245 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col11a1Q61245 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC15.47■□□□□ 0.07
Col11a1Q61245 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Col11a1Q61245 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC15.47■□□□□ 0.07
Col11a1Q61245 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC15.47■□□□□ 0.07
Col11a1Q61245 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC15.47■□□□□ 0.07
Col11a1Q61245 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC15.47■□□□□ 0.07
Col11a1Q61245 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col11a1Q61245 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col11a1Q61245 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col11a1Q61245 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col11a1Q61245 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.47■□□□□ 0.07
Col11a1Q61245 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col11a1Q61245 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.47■□□□□ 0.07
Col11a1Q61245 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col11a1Q61245 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Col11a1Q61245 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col11a1Q61245 Efs-202ENSMUST00000227037 2540 ntBASIC15.47■□□□□ 0.07
Col11a1Q61245 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Col11a1Q61245 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col11a1Q61245 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col11a1Q61245 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col11a1Q61245 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Col11a1Q61245 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC15.47■□□□□ 0.07
Col11a1Q61245 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC15.47■□□□□ 0.07
Col11a1Q61245 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col11a1Q61245 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col11a1Q61245 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col11a1Q61245 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Col11a1Q61245 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.47■□□□□ 0.07
Col11a1Q61245 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Col11a1Q61245 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
Col11a1Q61245 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Col11a1Q61245 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC15.47■□□□□ 0.07
Col11a1Q61245 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col11a1Q61245 AC022775.2-201ENSMUST00000227885 646 ntBASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms