Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mre11Q61216 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mre11Q61216 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Mre11Q61216 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mre11Q61216 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mre11Q61216 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Mre11Q61216 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.95■□□□□ 0.3
Mre11Q61216 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mre11Q61216 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mre11Q61216 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mre11Q61216 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC16.95■□□□□ 0.3
Mre11Q61216 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Mre11Q61216 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.95■□□□□ 0.3
Mre11Q61216 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.95■□□□□ 0.3
Mre11Q61216 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.95■□□□□ 0.3
Mre11Q61216 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mre11Q61216 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mre11Q61216 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Mre11Q61216 Gm27196-201ENSMUST00000184787 2582 ntBASIC16.95■□□□□ 0.3
Mre11Q61216 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mre11Q61216 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mre11Q61216 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Mre11Q61216 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mre11Q61216 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mre11Q61216 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC16.95■□□□□ 0.3
Mre11Q61216 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Mre11Q61216 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
Mre11Q61216 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mre11Q61216 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Mre11Q61216 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC16.94■□□□□ 0.3
Mre11Q61216 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC16.94■□□□□ 0.3
Mre11Q61216 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mre11Q61216 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Mre11Q61216 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Mre11Q61216 Gm7284-201ENSMUST00000131667 944 ntBASIC16.94■□□□□ 0.3
Mre11Q61216 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Mre11Q61216 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Mre11Q61216 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Mre11Q61216 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mre11Q61216 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC16.94■□□□□ 0.3
Mre11Q61216 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mre11Q61216 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Mre11Q61216 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Mre11Q61216 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mre11Q61216 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC16.94■□□□□ 0.3
Mre11Q61216 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Mre11Q61216 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mre11Q61216 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mre11Q61216 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mre11Q61216 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Mre11Q61216 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mre11Q61216 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mre11Q61216 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mre11Q61216 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mre11Q61216 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mre11Q61216 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Mre11Q61216 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC16.93■□□□□ 0.3
Mre11Q61216 AC126549.2-201ENSMUST00000223997 1976 ntBASIC16.93■□□□□ 0.3
Mre11Q61216 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Mre11Q61216 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mre11Q61216 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mre11Q61216 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mre11Q61216 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mre11Q61216 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mre11Q61216 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.93■□□□□ 0.3
Mre11Q61216 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mre11Q61216 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Mre11Q61216 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Mre11Q61216 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mre11Q61216 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mre11Q61216 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Mre11Q61216 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mre11Q61216 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Mre11Q61216 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mre11Q61216 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mre11Q61216 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mre11Q61216 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mre11Q61216 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Mre11Q61216 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mre11Q61216 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mre11Q61216 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Mre11Q61216 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mre11Q61216 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Mre11Q61216 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.93■□□□□ 0.3
Mre11Q61216 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mre11Q61216 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mre11Q61216 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mre11Q61216 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Mre11Q61216 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Mre11Q61216 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mre11Q61216 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
Mre11Q61216 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Mre11Q61216 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mre11Q61216 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Mre11Q61216 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC16.92■□□□□ 0.3
Mre11Q61216 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Mre11Q61216 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mre11Q61216 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mre11Q61216 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Mre11Q61216 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms