Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
Shroom1Q5SX79 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Shroom1Q5SX79 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Shroom1Q5SX79 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Shroom1Q5SX79 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
Shroom1Q5SX79 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Shroom1Q5SX79 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.05■□□□□ -0
Shroom1Q5SX79 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Shroom1Q5SX79 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Shroom1Q5SX79 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shroom1Q5SX79 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Shroom1Q5SX79 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Shroom1Q5SX79 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.04■□□□□ -0
Shroom1Q5SX79 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shroom1Q5SX79 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shroom1Q5SX79 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shroom1Q5SX79 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shroom1Q5SX79 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shroom1Q5SX79 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shroom1Q5SX79 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC15.04■□□□□ -0
Shroom1Q5SX79 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC15.04■□□□□ -0
Shroom1Q5SX79 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.04■□□□□ -0
Shroom1Q5SX79 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC15.04■□□□□ -0
Shroom1Q5SX79 Gm18018-201ENSMUST00000198273 408 ntBASIC15.04■□□□□ -0
Shroom1Q5SX79 Gm6916-202ENSMUST00000205523 195 ntBASIC15.04■□□□□ -0
Shroom1Q5SX79 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Shroom1Q5SX79 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC15.04■□□□□ -0
Shroom1Q5SX79 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Shroom1Q5SX79 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shroom1Q5SX79 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shroom1Q5SX79 Gm6180-201ENSMUST00000065243 498 ntBASIC15.04■□□□□ -0
Shroom1Q5SX79 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shroom1Q5SX79 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.04■□□□□ -0
Shroom1Q5SX79 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shroom1Q5SX79 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shroom1Q5SX79 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.04■□□□□ -0
Shroom1Q5SX79 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Shroom1Q5SX79 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.04■□□□□ -0
Shroom1Q5SX79 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shroom1Q5SX79 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Shroom1Q5SX79 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Shroom1Q5SX79 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Shroom1Q5SX79 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC15.04■□□□□ -0
Shroom1Q5SX79 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Shroom1Q5SX79 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Shroom1Q5SX79 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Shroom1Q5SX79 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Shroom1Q5SX79 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Shroom1Q5SX79 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC15.03■□□□□ -0
Shroom1Q5SX79 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15.03■□□□□ -0
Shroom1Q5SX79 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.03■□□□□ -0
Shroom1Q5SX79 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Shroom1Q5SX79 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Shroom1Q5SX79 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Shroom1Q5SX79 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Shroom1Q5SX79 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC15.03■□□□□ -0
Shroom1Q5SX79 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Shroom1Q5SX79 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15.03■□□□□ -0
Shroom1Q5SX79 Gm9797-201ENSMUST00000052902 613 ntBASIC15.03■□□□□ -0
Shroom1Q5SX79 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC15.03■□□□□ -0
Shroom1Q5SX79 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Shroom1Q5SX79 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.03■□□□□ -0
Shroom1Q5SX79 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Shroom1Q5SX79 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC15.03■□□□□ -0
Shroom1Q5SX79 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Shroom1Q5SX79 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Shroom1Q5SX79 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Shroom1Q5SX79 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.03■□□□□ -0
Shroom1Q5SX79 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Shroom1Q5SX79 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Shroom1Q5SX79 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Shroom1Q5SX79 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Shroom1Q5SX79 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Shroom1Q5SX79 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.02■□□□□ -0
Shroom1Q5SX79 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.02■□□□□ -0
Shroom1Q5SX79 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Shroom1Q5SX79 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Shroom1Q5SX79 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Shroom1Q5SX79 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Shroom1Q5SX79 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Shroom1Q5SX79 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Shroom1Q5SX79 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.02■□□□□ -0
Shroom1Q5SX79 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC15.02■□□□□ -0
Shroom1Q5SX79 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Shroom1Q5SX79 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Shroom1Q5SX79 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Shroom1Q5SX79 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.02■□□□□ -0
Shroom1Q5SX79 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Shroom1Q5SX79 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Shroom1Q5SX79 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC15.02■□□□□ -0
Shroom1Q5SX79 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC15.02■□□□□ -0
Shroom1Q5SX79 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.02■□□□□ -0
Shroom1Q5SX79 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC15.02■□□□□ -0
Shroom1Q5SX79 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Shroom1Q5SX79 Gm33320-201ENSMUST00000192232 530 ntBASIC15.02■□□□□ -0
Shroom1Q5SX79 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC15.02■□□□□ -0
Shroom1Q5SX79 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.02■□□□□ -0
Shroom1Q5SX79 AC121598.1-201ENSMUST00000228224 1019 ntBASIC15.02■□□□□ -0
Shroom1Q5SX79 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.02□□□□□ -0.01
Shroom1Q5SX79 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms