Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-3Q5R1C3 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Trav3-3Q5R1C3 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-3Q5R1C3 Gm7899-201ENSMUST00000192935 1897 ntBASIC10.61□□□□□ -0.71
Trav3-3Q5R1C3 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-3Q5R1C3 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-3Q5R1C3 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-3Q5R1C3 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-3Q5R1C3 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-3Q5R1C3 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-3Q5R1C3 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-3Q5R1C3 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-3Q5R1C3 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-3Q5R1C3 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-3Q5R1C3 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-3Q5R1C3 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-3Q5R1C3 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-3Q5R1C3 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Gm37014-201ENSMUST00000194723 2253 ntBASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Gm8258-201ENSMUST00000055593 1449 ntBASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Gm4609-201ENSMUST00000106443 1002 ntBASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Gm5138-201ENSMUST00000113842 1002 ntBASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Gm15191-201ENSMUST00000117933 1000 ntBASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Gm12182-201ENSMUST00000118655 1008 ntBASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Gm13882-201ENSMUST00000120886 1002 ntBASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Gm10284-201ENSMUST00000145057 1005 ntBASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Gm10481-201ENSMUST00000179228 1002 ntBASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Gm2574-201ENSMUST00000181051 1002 ntBASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Gm3200-201ENSMUST00000181493 1002 ntBASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Gm10231-201ENSMUST00000181584 441 ntBASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Gm8825-201ENSMUST00000182565 998 ntBASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Gm4518-201ENSMUST00000182638 718 ntBASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Gm8330-201ENSMUST00000182754 1008 ntBASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Gm4575-201ENSMUST00000182991 1002 ntBASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Gm8709-201ENSMUST00000183230 1012 ntBASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Gm44454-201ENSMUST00000198541 138 ntBASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Gm10175-202ENSMUST00000208752 441 ntBASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Gm19164-201ENSMUST00000210667 640 ntBASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 AC121577.1-201ENSMUST00000227302 707 ntBASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Gm10293-201ENSMUST00000076317 1002 ntBASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Gm6316-201ENSMUST00000082064 1020 ntBASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-3Q5R1C3 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.59□□□□□ -0.71
Trav3-3Q5R1C3 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-3Q5R1C3 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-3Q5R1C3 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-3Q5R1C3 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Trav3-3Q5R1C3 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-3Q5R1C3 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav3-3Q5R1C3 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-3Q5R1C3 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-3Q5R1C3 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms