Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx49Q4FZF3 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx49Q4FZF3 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Ddx49Q4FZF3 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx49Q4FZF3 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx49Q4FZF3 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx49Q4FZF3 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx49Q4FZF3 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx49Q4FZF3 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx49Q4FZF3 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx49Q4FZF3 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx49Q4FZF3 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx49Q4FZF3 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx49Q4FZF3 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.42■□□□□ 0.22
Ddx49Q4FZF3 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx49Q4FZF3 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC16.42■□□□□ 0.22
Ddx49Q4FZF3 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx49Q4FZF3 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Ddx49Q4FZF3 Trav4d-2-201ENSMUST00000120914 335 ntBASIC16.42■□□□□ 0.22
Ddx49Q4FZF3 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.42■□□□□ 0.22
Ddx49Q4FZF3 Gm4804-201ENSMUST00000182234 999 ntBASIC16.42■□□□□ 0.22
Ddx49Q4FZF3 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx49Q4FZF3 AC110817.1-201ENSMUST00000225706 605 ntBASIC16.42■□□□□ 0.22
Ddx49Q4FZF3 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx49Q4FZF3 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
Ddx49Q4FZF3 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx49Q4FZF3 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx49Q4FZF3 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx49Q4FZF3 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Ddx49Q4FZF3 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx49Q4FZF3 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx49Q4FZF3 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Ddx49Q4FZF3 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx49Q4FZF3 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ddx49Q4FZF3 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx49Q4FZF3 Gm9252-201ENSMUST00000172364 1602 ntBASIC16.41■□□□□ 0.22
Ddx49Q4FZF3 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx49Q4FZF3 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.41■□□□□ 0.22
Ddx49Q4FZF3 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx49Q4FZF3 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx49Q4FZF3 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx49Q4FZF3 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx49Q4FZF3 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx49Q4FZF3 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx49Q4FZF3 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx49Q4FZF3 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx49Q4FZF3 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx49Q4FZF3 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Ddx49Q4FZF3 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Ddx49Q4FZF3 Snora78-201ENSMUST00000158630 128 ntBASIC16.41■□□□□ 0.22
Ddx49Q4FZF3 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC16.41■□□□□ 0.22
Ddx49Q4FZF3 Gm17420-201ENSMUST00000164753 153 ntBASIC16.41■□□□□ 0.22
Ddx49Q4FZF3 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC16.41■□□□□ 0.22
Ddx49Q4FZF3 Gm37424-201ENSMUST00000191727 561 ntBASIC16.41■□□□□ 0.22
Ddx49Q4FZF3 Gm38230-201ENSMUST00000193572 1159 ntBASIC16.41■□□□□ 0.22
Ddx49Q4FZF3 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx49Q4FZF3 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Ddx49Q4FZF3 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Ddx49Q4FZF3 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Ddx49Q4FZF3 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx49Q4FZF3 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx49Q4FZF3 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx49Q4FZF3 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx49Q4FZF3 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx49Q4FZF3 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx49Q4FZF3 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx49Q4FZF3 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx49Q4FZF3 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx49Q4FZF3 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx49Q4FZF3 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx49Q4FZF3 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Ddx49Q4FZF3 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ddx49Q4FZF3 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx49Q4FZF3 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx49Q4FZF3 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx49Q4FZF3 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx49Q4FZF3 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.4■□□□□ 0.22
Ddx49Q4FZF3 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx49Q4FZF3 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx49Q4FZF3 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.4■□□□□ 0.22
Ddx49Q4FZF3 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.4■□□□□ 0.22
Ddx49Q4FZF3 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC16.4■□□□□ 0.22
Ddx49Q4FZF3 Mir1247-201ENSMUST00000116706 82 ntBASIC16.4■□□□□ 0.22
Ddx49Q4FZF3 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx49Q4FZF3 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx49Q4FZF3 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC16.4■□□□□ 0.22
Ddx49Q4FZF3 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC16.4■□□□□ 0.22
Ddx49Q4FZF3 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC16.4■□□□□ 0.22
Ddx49Q4FZF3 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx49Q4FZF3 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx49Q4FZF3 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx49Q4FZF3 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx49Q4FZF3 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx49Q4FZF3 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx49Q4FZF3 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx49Q4FZF3 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx49Q4FZF3 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx49Q4FZF3 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx49Q4FZF3 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx49Q4FZF3 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms