Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim40Q3UWA4 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim40Q3UWA4 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trim40Q3UWA4 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Trim40Q3UWA4 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim40Q3UWA4 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim40Q3UWA4 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim40Q3UWA4 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim40Q3UWA4 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trim40Q3UWA4 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.27□□□□□ -0.28
Trim40Q3UWA4 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim40Q3UWA4 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim40Q3UWA4 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim40Q3UWA4 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim40Q3UWA4 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim40Q3UWA4 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim40Q3UWA4 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim40Q3UWA4 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim40Q3UWA4 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.27□□□□□ -0.29
Trim40Q3UWA4 Gm28033-201ENSMUST00000184224 96 ntBASIC13.27□□□□□ -0.29
Trim40Q3UWA4 Gm2451-201ENSMUST00000199447 999 ntBASIC13.27□□□□□ -0.29
Trim40Q3UWA4 Gm10290-201ENSMUST00000200451 999 ntBASIC13.27□□□□□ -0.29
Trim40Q3UWA4 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.27□□□□□ -0.29
Trim40Q3UWA4 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim40Q3UWA4 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim40Q3UWA4 Birc2-201ENSMUST00000054878 378 ntBASIC13.27□□□□□ -0.29
Trim40Q3UWA4 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim40Q3UWA4 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
Trim40Q3UWA4 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trim40Q3UWA4 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trim40Q3UWA4 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trim40Q3UWA4 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim40Q3UWA4 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim40Q3UWA4 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
Trim40Q3UWA4 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim40Q3UWA4 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim40Q3UWA4 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim40Q3UWA4 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim40Q3UWA4 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim40Q3UWA4 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Trim40Q3UWA4 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim40Q3UWA4 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim40Q3UWA4 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Trim40Q3UWA4 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trim40Q3UWA4 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim40Q3UWA4 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim40Q3UWA4 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trim40Q3UWA4 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Trim40Q3UWA4 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim40Q3UWA4 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Trim40Q3UWA4 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim40Q3UWA4 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Trim40Q3UWA4 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim40Q3UWA4 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim40Q3UWA4 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim40Q3UWA4 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim40Q3UWA4 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim40Q3UWA4 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim40Q3UWA4 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim40Q3UWA4 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trim40Q3UWA4 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.26□□□□□ -0.29
Trim40Q3UWA4 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Trim40Q3UWA4 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim40Q3UWA4 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.26□□□□□ -0.29
Trim40Q3UWA4 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim40Q3UWA4 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.26□□□□□ -0.29
Trim40Q3UWA4 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim40Q3UWA4 Gm6376-201ENSMUST00000209407 580 ntBASIC13.26□□□□□ -0.29
Trim40Q3UWA4 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim40Q3UWA4 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim40Q3UWA4 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim40Q3UWA4 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim40Q3UWA4 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim40Q3UWA4 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim40Q3UWA4 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim40Q3UWA4 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim40Q3UWA4 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim40Q3UWA4 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim40Q3UWA4 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim40Q3UWA4 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.26□□□□□ -0.29
Trim40Q3UWA4 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim40Q3UWA4 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim40Q3UWA4 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Trim40Q3UWA4 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim40Q3UWA4 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim40Q3UWA4 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim40Q3UWA4 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim40Q3UWA4 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim40Q3UWA4 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trim40Q3UWA4 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trim40Q3UWA4 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim40Q3UWA4 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim40Q3UWA4 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim40Q3UWA4 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim40Q3UWA4 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim40Q3UWA4 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trim40Q3UWA4 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Trim40Q3UWA4 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.25□□□□□ -0.29
Trim40Q3UWA4 Gm11764-201ENSMUST00000120221 623 ntBASIC13.25□□□□□ -0.29
Trim40Q3UWA4 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms