Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 Gm11779-201ENSMUST00000118541 368 ntBASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 Gm21156-201ENSMUST00000189693 869 ntBASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 Gm6991-201ENSMUST00000218475 1178 ntBASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Shisa3Q3UPR0 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.21□□□□□ -0.45
Shisa3Q3UPR0 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa3Q3UPR0 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Shisa3Q3UPR0 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa3Q3UPR0 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa3Q3UPR0 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa3Q3UPR0 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa3Q3UPR0 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa3Q3UPR0 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa3Q3UPR0 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa3Q3UPR0 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa3Q3UPR0 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Shisa3Q3UPR0 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa3Q3UPR0 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.21□□□□□ -0.45
Shisa3Q3UPR0 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa3Q3UPR0 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.21□□□□□ -0.45
Shisa3Q3UPR0 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Shisa3Q3UPR0 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa3Q3UPR0 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa3Q3UPR0 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa3Q3UPR0 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa3Q3UPR0 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa3Q3UPR0 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa3Q3UPR0 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa3Q3UPR0 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa3Q3UPR0 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa3Q3UPR0 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa3Q3UPR0 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa3Q3UPR0 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Shisa3Q3UPR0 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.21□□□□□ -0.45
Shisa3Q3UPR0 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.21□□□□□ -0.45
Shisa3Q3UPR0 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.21□□□□□ -0.45
Shisa3Q3UPR0 Gm8000-201ENSMUST00000188378 592 ntBASIC12.21□□□□□ -0.45
Shisa3Q3UPR0 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.21□□□□□ -0.45
Shisa3Q3UPR0 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa3Q3UPR0 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa3Q3UPR0 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa3Q3UPR0 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa3Q3UPR0 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa3Q3UPR0 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.21□□□□□ -0.45
Shisa3Q3UPR0 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Shisa3Q3UPR0 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Shisa3Q3UPR0 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Shisa3Q3UPR0 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Shisa3Q3UPR0 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Shisa3Q3UPR0 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Shisa3Q3UPR0 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Shisa3Q3UPR0 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Shisa3Q3UPR0 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Shisa3Q3UPR0 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Shisa3Q3UPR0 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
Shisa3Q3UPR0 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.21□□□□□ -0.46
Shisa3Q3UPR0 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Shisa3Q3UPR0 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms