Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf44Q3UHJ8 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf44Q3UHJ8 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
Rnf44Q3UHJ8 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf44Q3UHJ8 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf44Q3UHJ8 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf44Q3UHJ8 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.65□□□□□ -0.22
Rnf44Q3UHJ8 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf44Q3UHJ8 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf44Q3UHJ8 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf44Q3UHJ8 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Rnf44Q3UHJ8 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Rnf44Q3UHJ8 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rnf44Q3UHJ8 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf44Q3UHJ8 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf44Q3UHJ8 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf44Q3UHJ8 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf44Q3UHJ8 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf44Q3UHJ8 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.64□□□□□ -0.23
Rnf44Q3UHJ8 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf44Q3UHJ8 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf44Q3UHJ8 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.64□□□□□ -0.23
Rnf44Q3UHJ8 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.64□□□□□ -0.23
Rnf44Q3UHJ8 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.64□□□□□ -0.23
Rnf44Q3UHJ8 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.64□□□□□ -0.23
Rnf44Q3UHJ8 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf44Q3UHJ8 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf44Q3UHJ8 Gm9063-201ENSMUST00000223299 582 ntBASIC13.64□□□□□ -0.23
Rnf44Q3UHJ8 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.64□□□□□ -0.23
Rnf44Q3UHJ8 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf44Q3UHJ8 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf44Q3UHJ8 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf44Q3UHJ8 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf44Q3UHJ8 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Rnf44Q3UHJ8 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf44Q3UHJ8 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf44Q3UHJ8 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf44Q3UHJ8 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf44Q3UHJ8 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf44Q3UHJ8 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf44Q3UHJ8 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf44Q3UHJ8 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf44Q3UHJ8 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf44Q3UHJ8 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.64□□□□□ -0.23
Rnf44Q3UHJ8 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.63□□□□□ -0.23
Rnf44Q3UHJ8 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf44Q3UHJ8 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf44Q3UHJ8 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf44Q3UHJ8 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf44Q3UHJ8 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Rnf44Q3UHJ8 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf44Q3UHJ8 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf44Q3UHJ8 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf44Q3UHJ8 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf44Q3UHJ8 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf44Q3UHJ8 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.63□□□□□ -0.23
Rnf44Q3UHJ8 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf44Q3UHJ8 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf44Q3UHJ8 Gm6916-202ENSMUST00000205523 195 ntBASIC13.63□□□□□ -0.23
Rnf44Q3UHJ8 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.63□□□□□ -0.23
Rnf44Q3UHJ8 Gm7775-201ENSMUST00000218871 853 ntBASIC13.63□□□□□ -0.23
Rnf44Q3UHJ8 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.63□□□□□ -0.23
Rnf44Q3UHJ8 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf44Q3UHJ8 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf44Q3UHJ8 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf44Q3UHJ8 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf44Q3UHJ8 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf44Q3UHJ8 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.63□□□□□ -0.23
Rnf44Q3UHJ8 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf44Q3UHJ8 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf44Q3UHJ8 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf44Q3UHJ8 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf44Q3UHJ8 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf44Q3UHJ8 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Rnf44Q3UHJ8 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf44Q3UHJ8 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Rnf44Q3UHJ8 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.63□□□□□ -0.23
Rnf44Q3UHJ8 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Rnf44Q3UHJ8 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.62□□□□□ -0.23
Rnf44Q3UHJ8 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.62□□□□□ -0.23
Rnf44Q3UHJ8 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.62□□□□□ -0.23
Rnf44Q3UHJ8 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf44Q3UHJ8 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf44Q3UHJ8 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf44Q3UHJ8 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf44Q3UHJ8 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rnf44Q3UHJ8 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf44Q3UHJ8 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf44Q3UHJ8 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf44Q3UHJ8 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf44Q3UHJ8 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf44Q3UHJ8 Auts2-212ENSMUST00000178555 309 ntBASIC13.62□□□□□ -0.23
Rnf44Q3UHJ8 Mir7023-201ENSMUST00000185093 64 ntBASIC13.62□□□□□ -0.23
Rnf44Q3UHJ8 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.62□□□□□ -0.23
Rnf44Q3UHJ8 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Rnf44Q3UHJ8 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf44Q3UHJ8 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.62□□□□□ -0.23
Rnf44Q3UHJ8 Gm9229-201ENSMUST00000222777 126 ntBASIC13.62□□□□□ -0.23
Rnf44Q3UHJ8 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf44Q3UHJ8 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms