Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 Cdk7-205ENSMUST00000225990 1159 ntBASIC16.8■□□□□ 0.28
Lins1Q3U1D0 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lins1Q3U1D0 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lins1Q3U1D0 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lins1Q3U1D0 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lins1Q3U1D0 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lins1Q3U1D0 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lins1Q3U1D0 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lins1Q3U1D0 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lins1Q3U1D0 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lins1Q3U1D0 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Lins1Q3U1D0 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lins1Q3U1D0 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Lins1Q3U1D0 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lins1Q3U1D0 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lins1Q3U1D0 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lins1Q3U1D0 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lins1Q3U1D0 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Lins1Q3U1D0 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Lins1Q3U1D0 Gm15957-201ENSMUST00000118893 974 ntBASIC16.79■□□□□ 0.28
Lins1Q3U1D0 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Lins1Q3U1D0 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC16.79■□□□□ 0.28
Lins1Q3U1D0 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Lins1Q3U1D0 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lins1Q3U1D0 AC155286.1-201ENSMUST00000218632 448 ntBASIC16.79■□□□□ 0.28
Lins1Q3U1D0 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lins1Q3U1D0 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC16.79■□□□□ 0.28
Lins1Q3U1D0 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Lins1Q3U1D0 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lins1Q3U1D0 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lins1Q3U1D0 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lins1Q3U1D0 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lins1Q3U1D0 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lins1Q3U1D0 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lins1Q3U1D0 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lins1Q3U1D0 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Lins1Q3U1D0 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lins1Q3U1D0 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lins1Q3U1D0 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.78■□□□□ 0.28
Lins1Q3U1D0 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC16.78■□□□□ 0.28
Lins1Q3U1D0 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.78■□□□□ 0.28
Lins1Q3U1D0 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lins1Q3U1D0 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC16.78■□□□□ 0.28
Lins1Q3U1D0 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lins1Q3U1D0 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC16.78■□□□□ 0.28
Lins1Q3U1D0 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Lins1Q3U1D0 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC16.78■□□□□ 0.28
Lins1Q3U1D0 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC16.78■□□□□ 0.28
Lins1Q3U1D0 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Lins1Q3U1D0 AC238811.3-201ENSMUST00000225422 709 ntBASIC16.78■□□□□ 0.28
Lins1Q3U1D0 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lins1Q3U1D0 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lins1Q3U1D0 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Lins1Q3U1D0 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lins1Q3U1D0 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Lins1Q3U1D0 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lins1Q3U1D0 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Lins1Q3U1D0 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.77■□□□□ 0.28
Lins1Q3U1D0 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
Lins1Q3U1D0 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lins1Q3U1D0 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lins1Q3U1D0 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lins1Q3U1D0 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lins1Q3U1D0 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lins1Q3U1D0 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lins1Q3U1D0 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lins1Q3U1D0 Gm15222-202ENSMUST00000228667 1726 ntBASIC16.77■□□□□ 0.28
Lins1Q3U1D0 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lins1Q3U1D0 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lins1Q3U1D0 Gm11918-201ENSMUST00000121660 179 ntBASIC16.77■□□□□ 0.28
Lins1Q3U1D0 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC16.77■□□□□ 0.28
Lins1Q3U1D0 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC16.77■□□□□ 0.28
Lins1Q3U1D0 Gm5354-201ENSMUST00000182417 973 ntBASIC16.77■□□□□ 0.28
Lins1Q3U1D0 Gm21470-201ENSMUST00000187680 696 ntBASIC16.77■□□□□ 0.28
Lins1Q3U1D0 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC16.77■□□□□ 0.28
Lins1Q3U1D0 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lins1Q3U1D0 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lins1Q3U1D0 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lins1Q3U1D0 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Lins1Q3U1D0 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lins1Q3U1D0 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.77■□□□□ 0.27
Lins1Q3U1D0 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lins1Q3U1D0 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lins1Q3U1D0 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lins1Q3U1D0 Gm28182-201ENSMUST00000188354 2477 ntBASIC16.77■□□□□ 0.27
Lins1Q3U1D0 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Lins1Q3U1D0 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.77■□□□□ 0.27
Lins1Q3U1D0 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lins1Q3U1D0 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Lins1Q3U1D0 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC16.77■□□□□ 0.27
Lins1Q3U1D0 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lins1Q3U1D0 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lins1Q3U1D0 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lins1Q3U1D0 Gm45546-201ENSMUST00000211053 2394 ntBASIC16.77■□□□□ 0.27
Lins1Q3U1D0 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Lins1Q3U1D0 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lins1Q3U1D0 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lins1Q3U1D0 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lins1Q3U1D0 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lins1Q3U1D0 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms