Protein–RNA interactions for Protein: Q3TIR1

Trappc13, Trafficking protein particle complex subunit 13, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc13Q3TIR1 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trappc13Q3TIR1 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trappc13Q3TIR1 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trappc13Q3TIR1 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trappc13Q3TIR1 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trappc13Q3TIR1 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trappc13Q3TIR1 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trappc13Q3TIR1 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
Trappc13Q3TIR1 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trappc13Q3TIR1 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trappc13Q3TIR1 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trappc13Q3TIR1 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trappc13Q3TIR1 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trappc13Q3TIR1 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trappc13Q3TIR1 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.17□□□□□ -0.3
Trappc13Q3TIR1 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trappc13Q3TIR1 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.17□□□□□ -0.3
Trappc13Q3TIR1 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.17□□□□□ -0.3
Trappc13Q3TIR1 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trappc13Q3TIR1 Gm44771-201ENSMUST00000206975 626 ntBASIC13.17□□□□□ -0.3
Trappc13Q3TIR1 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.17□□□□□ -0.3
Trappc13Q3TIR1 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.17□□□□□ -0.3
Trappc13Q3TIR1 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trappc13Q3TIR1 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trappc13Q3TIR1 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trappc13Q3TIR1 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trappc13Q3TIR1 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trappc13Q3TIR1 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trappc13Q3TIR1 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trappc13Q3TIR1 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trappc13Q3TIR1 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trappc13Q3TIR1 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trappc13Q3TIR1 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trappc13Q3TIR1 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.17□□□□□ -0.3
Trappc13Q3TIR1 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trappc13Q3TIR1 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trappc13Q3TIR1 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trappc13Q3TIR1 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trappc13Q3TIR1 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trappc13Q3TIR1 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trappc13Q3TIR1 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.16□□□□□ -0.3
Trappc13Q3TIR1 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trappc13Q3TIR1 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trappc13Q3TIR1 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trappc13Q3TIR1 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trappc13Q3TIR1 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trappc13Q3TIR1 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trappc13Q3TIR1 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trappc13Q3TIR1 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trappc13Q3TIR1 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trappc13Q3TIR1 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trappc13Q3TIR1 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trappc13Q3TIR1 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trappc13Q3TIR1 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trappc13Q3TIR1 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trappc13Q3TIR1 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trappc13Q3TIR1 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trappc13Q3TIR1 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trappc13Q3TIR1 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trappc13Q3TIR1 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trappc13Q3TIR1 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.16□□□□□ -0.3
Trappc13Q3TIR1 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trappc13Q3TIR1 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trappc13Q3TIR1 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.16□□□□□ -0.3
Trappc13Q3TIR1 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.16□□□□□ -0.3
Trappc13Q3TIR1 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trappc13Q3TIR1 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.16□□□□□ -0.3
Trappc13Q3TIR1 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trappc13Q3TIR1 Rprl2-201ENSMUST00000157150 290 ntBASIC13.16□□□□□ -0.3
Trappc13Q3TIR1 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.16□□□□□ -0.3
Trappc13Q3TIR1 Gm38225-201ENSMUST00000194001 393 ntBASIC13.16□□□□□ -0.3
Trappc13Q3TIR1 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.16□□□□□ -0.3
Trappc13Q3TIR1 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trappc13Q3TIR1 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Trappc13Q3TIR1 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trappc13Q3TIR1 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trappc13Q3TIR1 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trappc13Q3TIR1 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trappc13Q3TIR1 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trappc13Q3TIR1 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trappc13Q3TIR1 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trappc13Q3TIR1 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trappc13Q3TIR1 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trappc13Q3TIR1 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.15□□□□□ -0.3
Trappc13Q3TIR1 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trappc13Q3TIR1 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trappc13Q3TIR1 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trappc13Q3TIR1 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.15□□□□□ -0.3
Trappc13Q3TIR1 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.15□□□□□ -0.3
Trappc13Q3TIR1 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trappc13Q3TIR1 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trappc13Q3TIR1 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trappc13Q3TIR1 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trappc13Q3TIR1 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.15□□□□□ -0.3
Trappc13Q3TIR1 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trappc13Q3TIR1 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.15□□□□□ -0.3
Trappc13Q3TIR1 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trappc13Q3TIR1 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trappc13Q3TIR1 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.15□□□□□ -0.3
Trappc13Q3TIR1 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms