Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Q3KNL4 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Q3KNL4 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Q3KNL4 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Q3KNL4 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.9□□□□□ -0.19
Q3KNL4 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Q3KNL4 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Q3KNL4 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Q3KNL4 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Q3KNL4 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Q3KNL4 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Q3KNL4 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Q3KNL4 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Q3KNL4 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Q3KNL4 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Q3KNL4 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Q3KNL4 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Q3KNL4 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Q3KNL4 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Q3KNL4 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Q3KNL4 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.89□□□□□ -0.19
Q3KNL4 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.89□□□□□ -0.19
Q3KNL4 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.89□□□□□ -0.19
Q3KNL4 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.89□□□□□ -0.19
Q3KNL4 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Q3KNL4 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Q3KNL4 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Q3KNL4 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.89□□□□□ -0.19
Q3KNL4 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Q3KNL4 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Q3KNL4 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Q3KNL4 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Q3KNL4 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Q3KNL4 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Q3KNL4 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Q3KNL4 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Q3KNL4 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Q3KNL4 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Q3KNL4 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Q3KNL4 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Q3KNL4 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Q3KNL4 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Q3KNL4 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.88□□□□□ -0.19
Q3KNL4 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Q3KNL4 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Q3KNL4 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Q3KNL4 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Q3KNL4 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.88□□□□□ -0.19
Q3KNL4 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Q3KNL4 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Q3KNL4 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.88□□□□□ -0.19
Q3KNL4 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Q3KNL4 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Q3KNL4 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.88□□□□□ -0.19
Q3KNL4 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Q3KNL4 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.88□□□□□ -0.19
Q3KNL4 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Q3KNL4 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Q3KNL4 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.88□□□□□ -0.19
Q3KNL4 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Q3KNL4 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.88□□□□□ -0.19
Q3KNL4 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Q3KNL4 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.88□□□□□ -0.19
Q3KNL4 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Q3KNL4 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Q3KNL4 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.87□□□□□ -0.19
Q3KNL4 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Q3KNL4 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Q3KNL4 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Q3KNL4 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Q3KNL4 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Q3KNL4 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.87□□□□□ -0.19
Q3KNL4 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.87□□□□□ -0.19
Q3KNL4 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.87□□□□□ -0.19
Q3KNL4 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Q3KNL4 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.87□□□□□ -0.19
Q3KNL4 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Q3KNL4 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Q3KNL4 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Q3KNL4 Gm15427-201ENSMUST00000117288 531 ntBASIC13.87□□□□□ -0.19
Q3KNL4 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.87□□□□□ -0.19
Q3KNL4 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.87□□□□□ -0.19
Q3KNL4 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.87□□□□□ -0.19
Q3KNL4 Rpph1-201ENSMUST00000175096 319 ntBASIC13.87□□□□□ -0.19
Q3KNL4 Mir8117-201ENSMUST00000184773 107 ntBASIC13.87□□□□□ -0.19
Q3KNL4 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Q3KNL4 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.87□□□□□ -0.19
Q3KNL4 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Q3KNL4 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Q3KNL4 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Q3KNL4 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Q3KNL4 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Q3KNL4 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.87□□□□□ -0.19
Q3KNL4 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Q3KNL4 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Q3KNL4 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Q3KNL4 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Q3KNL4 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.87□□□□□ -0.19
Q3KNL4 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Q3KNL4 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms