Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Nhej1Q3KNJ2 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Nhej1Q3KNJ2 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
Nhej1Q3KNJ2 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nhej1Q3KNJ2 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nhej1Q3KNJ2 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Nhej1Q3KNJ2 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nhej1Q3KNJ2 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nhej1Q3KNJ2 Gm12020-201ENSMUST00000119030 2042 ntBASIC15.07■□□□□ 0
Nhej1Q3KNJ2 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Nhej1Q3KNJ2 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nhej1Q3KNJ2 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nhej1Q3KNJ2 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nhej1Q3KNJ2 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nhej1Q3KNJ2 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Nhej1Q3KNJ2 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Nhej1Q3KNJ2 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nhej1Q3KNJ2 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Nhej1Q3KNJ2 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Nhej1Q3KNJ2 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nhej1Q3KNJ2 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Nhej1Q3KNJ2 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Nhej1Q3KNJ2 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nhej1Q3KNJ2 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Nhej1Q3KNJ2 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Nhej1Q3KNJ2 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nhej1Q3KNJ2 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Nhej1Q3KNJ2 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.06■□□□□ 0
Nhej1Q3KNJ2 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.06■□□□□ 0
Nhej1Q3KNJ2 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC15.06■□□□□ 0
Nhej1Q3KNJ2 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC15.06■□□□□ 0
Nhej1Q3KNJ2 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nhej1Q3KNJ2 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nhej1Q3KNJ2 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Nhej1Q3KNJ2 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nhej1Q3KNJ2 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nhej1Q3KNJ2 Il17rd-203ENSMUST00000225146 3366 ntBASIC15.06■□□□□ 0
Nhej1Q3KNJ2 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Nhej1Q3KNJ2 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Nhej1Q3KNJ2 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nhej1Q3KNJ2 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nhej1Q3KNJ2 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Nhej1Q3KNJ2 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.05■□□□□ 0
Nhej1Q3KNJ2 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Nhej1Q3KNJ2 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Nhej1Q3KNJ2 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Nhej1Q3KNJ2 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Nhej1Q3KNJ2 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Nhej1Q3KNJ2 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Nhej1Q3KNJ2 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Nhej1Q3KNJ2 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
Nhej1Q3KNJ2 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Nhej1Q3KNJ2 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Nhej1Q3KNJ2 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Nhej1Q3KNJ2 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC15.05■□□□□ -0
Nhej1Q3KNJ2 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nhej1Q3KNJ2 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.05■□□□□ -0
Nhej1Q3KNJ2 Gm6973-201ENSMUST00000117080 721 ntBASIC15.05■□□□□ -0
Nhej1Q3KNJ2 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.05■□□□□ -0
Nhej1Q3KNJ2 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.05■□□□□ -0
Nhej1Q3KNJ2 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.05■□□□□ -0
Nhej1Q3KNJ2 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.05■□□□□ -0
Nhej1Q3KNJ2 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Nhej1Q3KNJ2 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Nhej1Q3KNJ2 Gm44492-201ENSMUST00000197012 141 ntBASIC15.05■□□□□ -0
Nhej1Q3KNJ2 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
Nhej1Q3KNJ2 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Nhej1Q3KNJ2 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nhej1Q3KNJ2 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.05■□□□□ -0
Nhej1Q3KNJ2 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nhej1Q3KNJ2 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
Nhej1Q3KNJ2 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.05■□□□□ -0
Nhej1Q3KNJ2 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nhej1Q3KNJ2 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC15.05■□□□□ -0
Nhej1Q3KNJ2 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nhej1Q3KNJ2 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC15.05■□□□□ -0
Nhej1Q3KNJ2 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nhej1Q3KNJ2 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC15.05■□□□□ -0
Nhej1Q3KNJ2 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15.05■□□□□ -0
Nhej1Q3KNJ2 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Nhej1Q3KNJ2 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15.05■□□□□ -0
Nhej1Q3KNJ2 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Nhej1Q3KNJ2 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.05■□□□□ -0
Nhej1Q3KNJ2 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC15.05■□□□□ -0
Nhej1Q3KNJ2 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nhej1Q3KNJ2 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Nhej1Q3KNJ2 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nhej1Q3KNJ2 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nhej1Q3KNJ2 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nhej1Q3KNJ2 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC15.04■□□□□ -0
Nhej1Q3KNJ2 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nhej1Q3KNJ2 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.04■□□□□ -0
Nhej1Q3KNJ2 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.04■□□□□ -0
Nhej1Q3KNJ2 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.04■□□□□ -0
Nhej1Q3KNJ2 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nhej1Q3KNJ2 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nhej1Q3KNJ2 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Nhej1Q3KNJ2 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nhej1Q3KNJ2 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nhej1Q3KNJ2 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms