Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.66□□□□□ -0.22
Ptchd3Q0EEE2 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ptchd3Q0EEE2 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.66□□□□□ -0.22
Ptchd3Q0EEE2 Gm44771-201ENSMUST00000206975 626 ntBASIC13.66□□□□□ -0.22
Ptchd3Q0EEE2 Gm18206-201ENSMUST00000207027 926 ntBASIC13.66□□□□□ -0.22
Ptchd3Q0EEE2 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ptchd3Q0EEE2 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Ptchd3Q0EEE2 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ptchd3Q0EEE2 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ptchd3Q0EEE2 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ptchd3Q0EEE2 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ptchd3Q0EEE2 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ptchd3Q0EEE2 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ptchd3Q0EEE2 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ptchd3Q0EEE2 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ptchd3Q0EEE2 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ptchd3Q0EEE2 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ptchd3Q0EEE2 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ptchd3Q0EEE2 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ptchd3Q0EEE2 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ptchd3Q0EEE2 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ptchd3Q0EEE2 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ptchd3Q0EEE2 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ptchd3Q0EEE2 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ptchd3Q0EEE2 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ptchd3Q0EEE2 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ptchd3Q0EEE2 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Ptchd3Q0EEE2 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ptchd3Q0EEE2 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.65□□□□□ -0.22
Ptchd3Q0EEE2 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ptchd3Q0EEE2 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ptchd3Q0EEE2 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ptchd3Q0EEE2 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ptchd3Q0EEE2 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ptchd3Q0EEE2 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ptchd3Q0EEE2 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ptchd3Q0EEE2 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ptchd3Q0EEE2 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ptchd3Q0EEE2 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ptchd3Q0EEE2 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ptchd3Q0EEE2 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ptchd3Q0EEE2 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.65□□□□□ -0.22
Ptchd3Q0EEE2 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ptchd3Q0EEE2 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ptchd3Q0EEE2 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ptchd3Q0EEE2 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ptchd3Q0EEE2 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ptchd3Q0EEE2 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ptchd3Q0EEE2 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ptchd3Q0EEE2 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Ptchd3Q0EEE2 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ptchd3Q0EEE2 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ptchd3Q0EEE2 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.65□□□□□ -0.22
Ptchd3Q0EEE2 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ptchd3Q0EEE2 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ptchd3Q0EEE2 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Ptchd3Q0EEE2 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ptchd3Q0EEE2 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Ptchd3Q0EEE2 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ptchd3Q0EEE2 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ptchd3Q0EEE2 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.65□□□□□ -0.22
Ptchd3Q0EEE2 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ptchd3Q0EEE2 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ptchd3Q0EEE2 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ptchd3Q0EEE2 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ptchd3Q0EEE2 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ptchd3Q0EEE2 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ptchd3Q0EEE2 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ptchd3Q0EEE2 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ptchd3Q0EEE2 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ptchd3Q0EEE2 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ptchd3Q0EEE2 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ptchd3Q0EEE2 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ptchd3Q0EEE2 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ptchd3Q0EEE2 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
Ptchd3Q0EEE2 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ptchd3Q0EEE2 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ptchd3Q0EEE2 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ptchd3Q0EEE2 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.64□□□□□ -0.23
Ptchd3Q0EEE2 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ptchd3Q0EEE2 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.64□□□□□ -0.23
Ptchd3Q0EEE2 Gm12260-201ENSMUST00000122447 411 ntBASIC13.64□□□□□ -0.23
Ptchd3Q0EEE2 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.64□□□□□ -0.23
Ptchd3Q0EEE2 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ptchd3Q0EEE2 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ptchd3Q0EEE2 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ptchd3Q0EEE2 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.64□□□□□ -0.23
Ptchd3Q0EEE2 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ptchd3Q0EEE2 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ptchd3Q0EEE2 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.64□□□□□ -0.23
Ptchd3Q0EEE2 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ptchd3Q0EEE2 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.64□□□□□ -0.23
Ptchd3Q0EEE2 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ptchd3Q0EEE2 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ptchd3Q0EEE2 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ptchd3Q0EEE2 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.64□□□□□ -0.23
Ptchd3Q0EEE2 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ptchd3Q0EEE2 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ptchd3Q0EEE2 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ptchd3Q0EEE2 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms