Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm12585-201ENSMUST00000117307 290 ntBASIC14.33□□□□□ -0.12
Ebf1Q07802 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.33□□□□□ -0.12
Ebf1Q07802 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf1Q07802 Gm9726-201ENSMUST00000180321 678 ntBASIC14.33□□□□□ -0.12
Ebf1Q07802 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf1Q07802 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ebf1Q07802 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf1Q07802 Mir125a-201ENSMUST00000083545 68 ntBASIC14.33□□□□□ -0.12
Ebf1Q07802 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf1Q07802 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf1Q07802 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf1Q07802 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ebf1Q07802 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf1Q07802 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Ebf1Q07802 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.33□□□□□ -0.12
Ebf1Q07802 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.33□□□□□ -0.12
Ebf1Q07802 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf1Q07802 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf1Q07802 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf1Q07802 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ebf1Q07802 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf1Q07802 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf1Q07802 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf1Q07802 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ebf1Q07802 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf1Q07802 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf1Q07802 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ebf1Q07802 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf1Q07802 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ebf1Q07802 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf1Q07802 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf1Q07802 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf1Q07802 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf1Q07802 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf1Q07802 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf1Q07802 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf1Q07802 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf1Q07802 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf1Q07802 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ebf1Q07802 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf1Q07802 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.32□□□□□ -0.12
Ebf1Q07802 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf1Q07802 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf1Q07802 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ebf1Q07802 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf1Q07802 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf1Q07802 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.32□□□□□ -0.12
Ebf1Q07802 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.32□□□□□ -0.12
Ebf1Q07802 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf1Q07802 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.32□□□□□ -0.12
Ebf1Q07802 Mir6392-201ENSMUST00000184924 108 ntBASIC14.32□□□□□ -0.12
Ebf1Q07802 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ebf1Q07802 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf1Q07802 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf1Q07802 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ebf1Q07802 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf1Q07802 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf1Q07802 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf1Q07802 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.32□□□□□ -0.12
Ebf1Q07802 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf1Q07802 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf1Q07802 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Ebf1Q07802 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf1Q07802 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf1Q07802 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf1Q07802 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf1Q07802 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf1Q07802 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf1Q07802 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf1Q07802 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.31□□□□□ -0.12
Ebf1Q07802 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf1Q07802 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf1Q07802 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ebf1Q07802 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.31□□□□□ -0.12
Ebf1Q07802 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.31□□□□□ -0.12
Ebf1Q07802 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf1Q07802 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf1Q07802 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ebf1Q07802 Gm15824-201ENSMUST00000119516 955 ntBASIC14.31□□□□□ -0.12
Ebf1Q07802 Gm15806-201ENSMUST00000120696 955 ntBASIC14.31□□□□□ -0.12
Ebf1Q07802 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.31□□□□□ -0.12
Ebf1Q07802 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.31□□□□□ -0.12
Ebf1Q07802 Mir7085-201ENSMUST00000184353 66 ntBASIC14.31□□□□□ -0.12
Ebf1Q07802 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.31□□□□□ -0.12
Ebf1Q07802 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.31□□□□□ -0.12
Ebf1Q07802 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.31□□□□□ -0.12
Ebf1Q07802 AC125350.2-201ENSMUST00000224737 727 ntBASIC14.31□□□□□ -0.12
Ebf1Q07802 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf1Q07802 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ebf1Q07802 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf1Q07802 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf1Q07802 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf1Q07802 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf1Q07802 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.31□□□□□ -0.12
Ebf1Q07802 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf1Q07802 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf1Q07802 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf1Q07802 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf1Q07802 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ebf1Q07802 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms