Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox4Q06831 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox4Q06831 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox4Q06831 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sox4Q06831 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox4Q06831 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox4Q06831 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox4Q06831 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox4Q06831 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.9□□□□□ -0.18
Sox4Q06831 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sox4Q06831 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Sox4Q06831 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sox4Q06831 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.9□□□□□ -0.18
Sox4Q06831 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sox4Q06831 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.9□□□□□ -0.18
Sox4Q06831 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.9□□□□□ -0.18
Sox4Q06831 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox4Q06831 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sox4Q06831 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox4Q06831 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox4Q06831 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox4Q06831 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sox4Q06831 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox4Q06831 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox4Q06831 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Sox4Q06831 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Sox4Q06831 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox4Q06831 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox4Q06831 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Sox4Q06831 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox4Q06831 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox4Q06831 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sox4Q06831 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox4Q06831 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox4Q06831 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Sox4Q06831 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
Sox4Q06831 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox4Q06831 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Sox4Q06831 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Sox4Q06831 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox4Q06831 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox4Q06831 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox4Q06831 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox4Q06831 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.89□□□□□ -0.19
Sox4Q06831 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.89□□□□□ -0.19
Sox4Q06831 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.89□□□□□ -0.19
Sox4Q06831 Gm15460-201ENSMUST00000118147 391 ntBASIC13.89□□□□□ -0.19
Sox4Q06831 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.89□□□□□ -0.19
Sox4Q06831 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Sox4Q06831 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox4Q06831 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox4Q06831 Gm44608-201ENSMUST00000206827 855 ntBASIC13.89□□□□□ -0.19
Sox4Q06831 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.89□□□□□ -0.19
Sox4Q06831 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox4Q06831 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox4Q06831 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
Sox4Q06831 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Sox4Q06831 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Sox4Q06831 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sox4Q06831 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.89□□□□□ -0.19
Sox4Q06831 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox4Q06831 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox4Q06831 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox4Q06831 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox4Q06831 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.89□□□□□ -0.19
Sox4Q06831 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox4Q06831 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sox4Q06831 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.89□□□□□ -0.19
Sox4Q06831 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sox4Q06831 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Sox4Q06831 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox4Q06831 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox4Q06831 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox4Q06831 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox4Q06831 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox4Q06831 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.88□□□□□ -0.19
Sox4Q06831 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox4Q06831 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.88□□□□□ -0.19
Sox4Q06831 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox4Q06831 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox4Q06831 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox4Q06831 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Sox4Q06831 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox4Q06831 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.88□□□□□ -0.19
Sox4Q06831 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox4Q06831 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox4Q06831 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.88□□□□□ -0.19
Sox4Q06831 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox4Q06831 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox4Q06831 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox4Q06831 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Sox4Q06831 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox4Q06831 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox4Q06831 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox4Q06831 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Sox4Q06831 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Sox4Q06831 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox4Q06831 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.88□□□□□ -0.19
Sox4Q06831 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox4Q06831 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms