Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Gm13616-201ENSMUST00000120600 222 ntBASIC12.43□□□□□ -0.42
Thbs3Q05895 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Thbs3Q05895 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.43□□□□□ -0.42
Thbs3Q05895 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Thbs3Q05895 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Thbs3Q05895 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Thbs3Q05895 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Thbs3Q05895 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Thbs3Q05895 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Thbs3Q05895 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Thbs3Q05895 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Thbs3Q05895 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Thbs3Q05895 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Thbs3Q05895 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Thbs3Q05895 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Thbs3Q05895 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Thbs3Q05895 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Thbs3Q05895 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thbs3Q05895 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thbs3Q05895 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thbs3Q05895 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Thbs3Q05895 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Thbs3Q05895 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thbs3Q05895 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thbs3Q05895 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thbs3Q05895 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thbs3Q05895 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thbs3Q05895 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.42□□□□□ -0.42
Thbs3Q05895 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thbs3Q05895 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thbs3Q05895 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thbs3Q05895 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thbs3Q05895 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thbs3Q05895 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thbs3Q05895 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thbs3Q05895 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thbs3Q05895 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thbs3Q05895 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thbs3Q05895 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.42□□□□□ -0.42
Thbs3Q05895 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thbs3Q05895 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.42□□□□□ -0.42
Thbs3Q05895 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thbs3Q05895 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.42□□□□□ -0.42
Thbs3Q05895 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.42□□□□□ -0.42
Thbs3Q05895 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thbs3Q05895 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thbs3Q05895 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Thbs3Q05895 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thbs3Q05895 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thbs3Q05895 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Thbs3Q05895 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Thbs3Q05895 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thbs3Q05895 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thbs3Q05895 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Thbs3Q05895 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Thbs3Q05895 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thbs3Q05895 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Thbs3Q05895 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thbs3Q05895 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thbs3Q05895 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thbs3Q05895 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thbs3Q05895 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thbs3Q05895 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thbs3Q05895 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thbs3Q05895 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thbs3Q05895 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Thbs3Q05895 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Thbs3Q05895 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Thbs3Q05895 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Thbs3Q05895 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Thbs3Q05895 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Thbs3Q05895 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Thbs3Q05895 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Thbs3Q05895 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Thbs3Q05895 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Thbs3Q05895 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Thbs3Q05895 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Thbs3Q05895 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Thbs3Q05895 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Thbs3Q05895 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Thbs3Q05895 Gm27533-201ENSMUST00000183800 152 ntBASIC12.41□□□□□ -0.42
Thbs3Q05895 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.41□□□□□ -0.42
Thbs3Q05895 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.41□□□□□ -0.42
Thbs3Q05895 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.41□□□□□ -0.42
Thbs3Q05895 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Thbs3Q05895 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Thbs3Q05895 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Thbs3Q05895 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Thbs3Q05895 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Thbs3Q05895 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.41□□□□□ -0.42
Thbs3Q05895 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Thbs3Q05895 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Thbs3Q05895 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Thbs3Q05895 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Thbs3Q05895 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Thbs3Q05895 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Thbs3Q05895 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.41□□□□□ -0.42
Thbs3Q05895 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Thbs3Q05895 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Thbs3Q05895 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms