Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.83□□□□□ -0.2
Col9a1Q05722 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col9a1Q05722 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.83□□□□□ -0.2
Col9a1Q05722 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col9a1Q05722 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.83□□□□□ -0.2
Col9a1Q05722 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC13.83□□□□□ -0.2
Col9a1Q05722 Gm25261-201ENSMUST00000157416 134 ntBASIC13.83□□□□□ -0.2
Col9a1Q05722 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col9a1Q05722 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.83□□□□□ -0.2
Col9a1Q05722 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
Col9a1Q05722 Gm27231-201ENSMUST00000185191 551 ntTSL 5 BASIC13.83□□□□□ -0.2
Col9a1Q05722 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col9a1Q05722 Gm44397-201ENSMUST00000195950 113 ntBASIC13.83□□□□□ -0.2
Col9a1Q05722 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col9a1Q05722 Gm42516-201ENSMUST00000198691 767 ntBASIC13.83□□□□□ -0.2
Col9a1Q05722 Gm43906-201ENSMUST00000203194 906 ntBASIC13.83□□□□□ -0.2
Col9a1Q05722 Gm44607-201ENSMUST00000205611 1090 ntBASIC13.83□□□□□ -0.2
Col9a1Q05722 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col9a1Q05722 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col9a1Q05722 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Col9a1Q05722 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.83□□□□□ -0.2
Col9a1Q05722 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col9a1Q05722 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Col9a1Q05722 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.83□□□□□ -0.2
Col9a1Q05722 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col9a1Q05722 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC13.83□□□□□ -0.2
Col9a1Q05722 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.83□□□□□ -0.2
Col9a1Q05722 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col9a1Q05722 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col9a1Q05722 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col9a1Q05722 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col9a1Q05722 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col9a1Q05722 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Col9a1Q05722 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col9a1Q05722 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col9a1Q05722 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Col9a1Q05722 Gm43081-201ENSMUST00000199082 1380 ntBASIC13.83□□□□□ -0.2
Col9a1Q05722 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col9a1Q05722 Gm7292-201ENSMUST00000194706 2527 ntBASIC13.83□□□□□ -0.2
Col9a1Q05722 Il15ra-205ENSMUST00000114833 1607 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col9a1Q05722 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Col9a1Q05722 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.82□□□□□ -0.2
Col9a1Q05722 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col9a1Q05722 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col9a1Q05722 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col9a1Q05722 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.82□□□□□ -0.2
Col9a1Q05722 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col9a1Q05722 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.82□□□□□ -0.2
Col9a1Q05722 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col9a1Q05722 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.82□□□□□ -0.2
Col9a1Q05722 Gm14539-201ENSMUST00000117527 174 ntBASIC13.82□□□□□ -0.2
Col9a1Q05722 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col9a1Q05722 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Col9a1Q05722 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC13.82□□□□□ -0.2
Col9a1Q05722 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Col9a1Q05722 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Col9a1Q05722 Gm45909-201ENSMUST00000212413 1031 ntBASIC13.82□□□□□ -0.2
Col9a1Q05722 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC13.82□□□□□ -0.2
Col9a1Q05722 CT010480.1-201ENSMUST00000223612 363 ntBASIC13.82□□□□□ -0.2
Col9a1Q05722 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Col9a1Q05722 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.82□□□□□ -0.2
Col9a1Q05722 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col9a1Q05722 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Col9a1Q05722 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col9a1Q05722 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col9a1Q05722 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Col9a1Q05722 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col9a1Q05722 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.82□□□□□ -0.2
Col9a1Q05722 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col9a1Q05722 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col9a1Q05722 Gm44975-201ENSMUST00000207435 1390 ntBASIC13.82□□□□□ -0.2
Col9a1Q05722 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col9a1Q05722 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col9a1Q05722 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col9a1Q05722 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col9a1Q05722 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a1Q05722 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a1Q05722 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a1Q05722 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a1Q05722 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.81□□□□□ -0.2
Col9a1Q05722 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a1Q05722 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Col9a1Q05722 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a1Q05722 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a1Q05722 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a1Q05722 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Col9a1Q05722 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a1Q05722 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a1Q05722 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a1Q05722 Gm12203-201ENSMUST00000118235 598 ntBASIC13.81□□□□□ -0.2
Col9a1Q05722 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a1Q05722 Gm12209-201ENSMUST00000120089 596 ntBASIC13.81□□□□□ -0.2
Col9a1Q05722 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.81□□□□□ -0.2
Col9a1Q05722 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a1Q05722 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a1Q05722 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.81□□□□□ -0.2
Col9a1Q05722 Gm2451-201ENSMUST00000199447 999 ntBASIC13.81□□□□□ -0.2
Col9a1Q05722 Gm10290-201ENSMUST00000200451 999 ntBASIC13.81□□□□□ -0.2
Col9a1Q05722 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC13.81□□□□□ -0.2
Col9a1Q05722 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms