Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cacna1sQ02789 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Cacna1sQ02789 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cacna1sQ02789 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Cacna1sQ02789 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC17.49■□□□□ 0.39
Cacna1sQ02789 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cacna1sQ02789 Gm10434-201ENSMUST00000101158 471 ntBASIC17.49■□□□□ 0.39
Cacna1sQ02789 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cacna1sQ02789 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
Cacna1sQ02789 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cacna1sQ02789 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cacna1sQ02789 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC17.49■□□□□ 0.39
Cacna1sQ02789 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cacna1sQ02789 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Cacna1sQ02789 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cacna1sQ02789 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1sQ02789 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC17.48■□□□□ 0.39
Cacna1sQ02789 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1sQ02789 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.48■□□□□ 0.39
Cacna1sQ02789 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1sQ02789 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1sQ02789 AC139054.1-201ENSMUST00000226898 1598 ntBASIC17.48■□□□□ 0.39
Cacna1sQ02789 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Cacna1sQ02789 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC17.48■□□□□ 0.39
Cacna1sQ02789 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC17.48■□□□□ 0.39
Cacna1sQ02789 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Cacna1sQ02789 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1sQ02789 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1sQ02789 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC17.48■□□□□ 0.39
Cacna1sQ02789 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1sQ02789 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1sQ02789 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Cacna1sQ02789 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1sQ02789 Gm25214-201ENSMUST00000104573 129 ntBASIC17.48■□□□□ 0.39
Cacna1sQ02789 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cacna1sQ02789 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC17.48■□□□□ 0.39
Cacna1sQ02789 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
Cacna1sQ02789 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC17.48■□□□□ 0.39
Cacna1sQ02789 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1sQ02789 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Cacna1sQ02789 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1sQ02789 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1sQ02789 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Cacna1sQ02789 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1sQ02789 Gm38049-201ENSMUST00000195698 1372 ntBASIC17.47■□□□□ 0.39
Cacna1sQ02789 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1sQ02789 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Cacna1sQ02789 Gm6159-201ENSMUST00000191249 1724 ntBASIC17.47■□□□□ 0.39
Cacna1sQ02789 Gm23270-201ENSMUST00000104055 131 ntBASIC17.47■□□□□ 0.39
Cacna1sQ02789 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1sQ02789 Gm2231-201ENSMUST00000125661 612 ntBASIC17.47■□□□□ 0.39
Cacna1sQ02789 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1sQ02789 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1sQ02789 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1sQ02789 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC17.47■□□□□ 0.39
Cacna1sQ02789 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Cacna1sQ02789 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1sQ02789 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1sQ02789 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1sQ02789 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1sQ02789 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1sQ02789 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cacna1sQ02789 Gm43423-201ENSMUST00000198390 2094 ntBASIC17.47■□□□□ 0.39
Cacna1sQ02789 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1sQ02789 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1sQ02789 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1sQ02789 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1sQ02789 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Cacna1sQ02789 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1sQ02789 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1sQ02789 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1sQ02789 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1sQ02789 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.46■□□□□ 0.39
Cacna1sQ02789 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1sQ02789 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1sQ02789 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC17.46■□□□□ 0.39
Cacna1sQ02789 Gm28693-202ENSMUST00000190758 331 ntBASIC17.46■□□□□ 0.39
Cacna1sQ02789 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1sQ02789 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC17.46■□□□□ 0.39
Cacna1sQ02789 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Cacna1sQ02789 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1sQ02789 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Cacna1sQ02789 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1sQ02789 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Cacna1sQ02789 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1sQ02789 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1sQ02789 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1sQ02789 Gm23200-201ENSMUST00000104379 132 ntBASIC17.46■□□□□ 0.38
Cacna1sQ02789 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cacna1sQ02789 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Cacna1sQ02789 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC17.46■□□□□ 0.38
Cacna1sQ02789 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC17.46■□□□□ 0.38
Cacna1sQ02789 Gm13570-201ENSMUST00000140763 309 ntBASIC17.46■□□□□ 0.38
Cacna1sQ02789 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC17.46■□□□□ 0.38
Cacna1sQ02789 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC17.46■□□□□ 0.38
Cacna1sQ02789 AA914427-201ENSMUST00000193194 1166 ntBASIC17.46■□□□□ 0.38
Cacna1sQ02789 Gm8099-201ENSMUST00000200510 742 ntBASIC17.46■□□□□ 0.38
Cacna1sQ02789 Gm4768-201ENSMUST00000206199 686 ntBASIC17.46■□□□□ 0.38
Cacna1sQ02789 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cacna1sQ02789 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC17.46■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms