Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a2Q02788 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a2Q02788 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a2Q02788 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a2Q02788 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.11□□□□□ -0.15
Col6a2Q02788 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Col6a2Q02788 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a2Q02788 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.1□□□□□ -0.15
Col6a2Q02788 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a2Q02788 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a2Q02788 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.1□□□□□ -0.15
Col6a2Q02788 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Col6a2Q02788 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a2Q02788 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a2Q02788 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.1□□□□□ -0.15
Col6a2Q02788 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a2Q02788 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a2Q02788 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a2Q02788 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a2Q02788 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a2Q02788 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.1□□□□□ -0.15
Col6a2Q02788 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a2Q02788 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a2Q02788 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a2Q02788 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a2Q02788 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.1□□□□□ -0.15
Col6a2Q02788 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a2Q02788 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Col6a2Q02788 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Col6a2Q02788 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Col6a2Q02788 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a2Q02788 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.1□□□□□ -0.15
Col6a2Q02788 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Col6a2Q02788 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.1□□□□□ -0.15
Col6a2Q02788 Gm42612-201ENSMUST00000197986 623 ntBASIC14.1□□□□□ -0.15
Col6a2Q02788 Gm43170-201ENSMUST00000199827 612 ntBASIC14.1□□□□□ -0.15
Col6a2Q02788 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.1□□□□□ -0.15
Col6a2Q02788 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a2Q02788 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.1□□□□□ -0.15
Col6a2Q02788 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a2Q02788 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a2Q02788 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a2Q02788 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Col6a2Q02788 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a2Q02788 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a2Q02788 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a2Q02788 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a2Q02788 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.09□□□□□ -0.15
Col6a2Q02788 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a2Q02788 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a2Q02788 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a2Q02788 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a2Q02788 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a2Q02788 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a2Q02788 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Col6a2Q02788 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Col6a2Q02788 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a2Q02788 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.09□□□□□ -0.15
Col6a2Q02788 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Col6a2Q02788 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.09□□□□□ -0.15
Col6a2Q02788 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.09□□□□□ -0.15
Col6a2Q02788 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Col6a2Q02788 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.09□□□□□ -0.15
Col6a2Q02788 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.09□□□□□ -0.15
Col6a2Q02788 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a2Q02788 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a2Q02788 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a2Q02788 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.09□□□□□ -0.15
Col6a2Q02788 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a2Q02788 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a2Q02788 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a2Q02788 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a2Q02788 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a2Q02788 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a2Q02788 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.09□□□□□ -0.15
Col6a2Q02788 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.09□□□□□ -0.15
Col6a2Q02788 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.09□□□□□ -0.15
Col6a2Q02788 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col6a2Q02788 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col6a2Q02788 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Col6a2Q02788 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.08□□□□□ -0.16
Col6a2Q02788 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.08□□□□□ -0.16
Col6a2Q02788 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a2Q02788 Gm12859-201ENSMUST00000117834 427 ntBASIC14.08□□□□□ -0.16
Col6a2Q02788 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.08□□□□□ -0.16
Col6a2Q02788 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a2Q02788 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a2Q02788 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a2Q02788 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a2Q02788 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a2Q02788 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Col6a2Q02788 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a2Q02788 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a2Q02788 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a2Q02788 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a2Q02788 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a2Q02788 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a2Q02788 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col6a2Q02788 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Col6a2Q02788 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms