Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1bP97952 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1bP97952 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1bP97952 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Scn1bP97952 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC12.93□□□□□ -0.34
Scn1bP97952 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC12.93□□□□□ -0.34
Scn1bP97952 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.93□□□□□ -0.34
Scn1bP97952 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.93□□□□□ -0.34
Scn1bP97952 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Scn1bP97952 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.93□□□□□ -0.34
Scn1bP97952 Gm18669-201ENSMUST00000216049 778 ntBASIC12.93□□□□□ -0.34
Scn1bP97952 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1bP97952 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1bP97952 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Scn1bP97952 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1bP97952 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1bP97952 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1bP97952 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1bP97952 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1bP97952 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Scn1bP97952 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.93□□□□□ -0.34
Scn1bP97952 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1bP97952 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1bP97952 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1bP97952 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.93□□□□□ -0.34
Scn1bP97952 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1bP97952 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.93□□□□□ -0.34
Scn1bP97952 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1bP97952 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1bP97952 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn1bP97952 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1bP97952 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Scn1bP97952 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1bP97952 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1bP97952 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1bP97952 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1bP97952 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1bP97952 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1bP97952 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Scn1bP97952 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1bP97952 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1bP97952 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1bP97952 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.92□□□□□ -0.34
Scn1bP97952 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.92□□□□□ -0.34
Scn1bP97952 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1bP97952 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.92□□□□□ -0.34
Scn1bP97952 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1bP97952 Gm10499-201ENSMUST00000174094 934 ntBASIC12.92□□□□□ -0.34
Scn1bP97952 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC12.92□□□□□ -0.34
Scn1bP97952 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.92□□□□□ -0.34
Scn1bP97952 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1bP97952 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1bP97952 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1bP97952 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1bP97952 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1bP97952 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1bP97952 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.92□□□□□ -0.34
Scn1bP97952 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Scn1bP97952 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1bP97952 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1bP97952 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.92□□□□□ -0.34
Scn1bP97952 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1bP97952 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1bP97952 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Scn1bP97952 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1bP97952 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1bP97952 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1bP97952 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1bP97952 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1bP97952 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1bP97952 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1bP97952 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Scn1bP97952 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1bP97952 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1bP97952 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1bP97952 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1bP97952 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1bP97952 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1bP97952 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC12.91□□□□□ -0.34
Scn1bP97952 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1bP97952 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Scn1bP97952 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC12.91□□□□□ -0.34
Scn1bP97952 Gm21362-201ENSMUST00000194272 928 ntBASIC12.91□□□□□ -0.34
Scn1bP97952 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1bP97952 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1bP97952 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1bP97952 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1bP97952 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1bP97952 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1bP97952 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Scn1bP97952 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1bP97952 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1bP97952 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1bP97952 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1bP97952 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1bP97952 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1bP97952 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1bP97952 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Scn1bP97952 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Scn1bP97952 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms