Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-2P97503 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.38□□□□□ -0.27
Nkx3-2P97503 Gm15487-201ENSMUST00000122373 465 ntBASIC13.38□□□□□ -0.27
Nkx3-2P97503 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-2P97503 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-2P97503 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-2P97503 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-2P97503 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-2P97503 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.38□□□□□ -0.27
Nkx3-2P97503 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.38□□□□□ -0.27
Nkx3-2P97503 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.38□□□□□ -0.27
Nkx3-2P97503 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-2P97503 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Nkx3-2P97503 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-2P97503 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-2P97503 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-2P97503 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-2P97503 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-2P97503 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-2P97503 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Nkx3-2P97503 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-2P97503 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-2P97503 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-2P97503 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-2P97503 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.38□□□□□ -0.27
Nkx3-2P97503 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-2P97503 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-2P97503 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx3-2P97503 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx3-2P97503 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.37□□□□□ -0.27
Nkx3-2P97503 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx3-2P97503 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Nkx3-2P97503 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx3-2P97503 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.37□□□□□ -0.27
Nkx3-2P97503 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx3-2P97503 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx3-2P97503 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.37□□□□□ -0.27
Nkx3-2P97503 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx3-2P97503 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx3-2P97503 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx3-2P97503 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.37□□□□□ -0.27
Nkx3-2P97503 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Nkx3-2P97503 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx3-2P97503 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx3-2P97503 Gm23547-201ENSMUST00000158210 271 ntBASIC13.37□□□□□ -0.27
Nkx3-2P97503 Gm24694-201ENSMUST00000180054 110 ntBASIC13.37□□□□□ -0.27
Nkx3-2P97503 Gm27663-201ENSMUST00000184839 110 ntBASIC13.37□□□□□ -0.27
Nkx3-2P97503 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx3-2P97503 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Nkx3-2P97503 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx3-2P97503 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx3-2P97503 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx3-2P97503 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx3-2P97503 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx3-2P97503 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Nkx3-2P97503 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx3-2P97503 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Nkx3-2P97503 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx3-2P97503 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx3-2P97503 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx3-2P97503 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx3-2P97503 Syt7-204ENSMUST00000223586 1344 ntBASIC13.37□□□□□ -0.27
Nkx3-2P97503 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx3-2P97503 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.36□□□□□ -0.27
Nkx3-2P97503 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx3-2P97503 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx3-2P97503 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx3-2P97503 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx3-2P97503 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx3-2P97503 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx3-2P97503 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Nkx3-2P97503 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.36□□□□□ -0.27
Nkx3-2P97503 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx3-2P97503 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Nkx3-2P97503 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Nkx3-2P97503 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx3-2P97503 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx3-2P97503 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx3-2P97503 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Nkx3-2P97503 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx3-2P97503 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx3-2P97503 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx3-2P97503 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx3-2P97503 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx3-2P97503 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx3-2P97503 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx3-2P97503 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Nkx3-2P97503 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx3-2P97503 BC001981-202ENSMUST00000191393 1545 ntBASIC13.35□□□□□ -0.27
Nkx3-2P97503 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx3-2P97503 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.35□□□□□ -0.27
Nkx3-2P97503 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
Nkx3-2P97503 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Nkx3-2P97503 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx3-2P97503 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx3-2P97503 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx3-2P97503 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx3-2P97503 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.35□□□□□ -0.27
Nkx3-2P97503 Mir1897-201ENSMUST00000122581 272 ntBASIC13.35□□□□□ -0.27
Nkx3-2P97503 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms