Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcc1P97496 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcc1P97496 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC17.61■□□□□ 0.41
Smarcc1P97496 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcc1P97496 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcc1P97496 Gm42471-201ENSMUST00000201457 1865 ntBASIC17.61■□□□□ 0.41
Smarcc1P97496 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcc1P97496 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcc1P97496 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcc1P97496 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcc1P97496 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.6■□□□□ 0.41
Smarcc1P97496 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcc1P97496 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcc1P97496 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Smarcc1P97496 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcc1P97496 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC17.6■□□□□ 0.41
Smarcc1P97496 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcc1P97496 Gm44397-201ENSMUST00000195950 113 ntBASIC17.6■□□□□ 0.41
Smarcc1P97496 Gm43818-201ENSMUST00000200605 466 ntBASIC17.6■□□□□ 0.41
Smarcc1P97496 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC17.6■□□□□ 0.41
Smarcc1P97496 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcc1P97496 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.6■□□□□ 0.41
Smarcc1P97496 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcc1P97496 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcc1P97496 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcc1P97496 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcc1P97496 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcc1P97496 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcc1P97496 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.6■□□□□ 0.41
Smarcc1P97496 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcc1P97496 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcc1P97496 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcc1P97496 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcc1P97496 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcc1P97496 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcc1P97496 Gm7553-201ENSMUST00000185805 1426 ntBASIC17.59■□□□□ 0.41
Smarcc1P97496 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcc1P97496 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC17.59■□□□□ 0.41
Smarcc1P97496 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcc1P97496 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC17.59■□□□□ 0.41
Smarcc1P97496 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC17.59■□□□□ 0.41
Smarcc1P97496 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC17.59■□□□□ 0.41
Smarcc1P97496 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC17.59■□□□□ 0.41
Smarcc1P97496 Gm27514-201ENSMUST00000183692 110 ntBASIC17.59■□□□□ 0.41
Smarcc1P97496 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC17.59■□□□□ 0.41
Smarcc1P97496 Gm7172-201ENSMUST00000218047 1152 ntBASIC17.59■□□□□ 0.41
Smarcc1P97496 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcc1P97496 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcc1P97496 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcc1P97496 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcc1P97496 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcc1P97496 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Smarcc1P97496 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Smarcc1P97496 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Smarcc1P97496 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcc1P97496 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcc1P97496 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcc1P97496 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Smarcc1P97496 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smarcc1P97496 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smarcc1P97496 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smarcc1P97496 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smarcc1P97496 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Smarcc1P97496 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smarcc1P97496 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Smarcc1P97496 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smarcc1P97496 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smarcc1P97496 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smarcc1P97496 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcc1P97496 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC17.58■□□□□ 0.4
Smarcc1P97496 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC17.58■□□□□ 0.4
Smarcc1P97496 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcc1P97496 AC166997.1-201ENSMUST00000225122 572 ntBASIC17.58■□□□□ 0.4
Smarcc1P97496 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcc1P97496 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcc1P97496 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcc1P97496 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC17.58■□□□□ 0.4
Smarcc1P97496 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcc1P97496 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcc1P97496 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcc1P97496 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcc1P97496 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcc1P97496 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Smarcc1P97496 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcc1P97496 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcc1P97496 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcc1P97496 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcc1P97496 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcc1P97496 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcc1P97496 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Smarcc1P97496 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.57■□□□□ 0.4
Smarcc1P97496 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcc1P97496 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcc1P97496 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcc1P97496 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcc1P97496 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcc1P97496 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC17.57■□□□□ 0.4
Smarcc1P97496 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcc1P97496 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcc1P97496 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms