Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.03□□□□□ -0.32
Cacna1aP97445 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cacna1aP97445 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cacna1aP97445 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cacna1aP97445 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.03□□□□□ -0.32
Cacna1aP97445 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cacna1aP97445 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.03□□□□□ -0.32
Cacna1aP97445 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cacna1aP97445 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Cacna1aP97445 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cacna1aP97445 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cacna1aP97445 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cacna1aP97445 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.03□□□□□ -0.32
Cacna1aP97445 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cacna1aP97445 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cacna1aP97445 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cacna1aP97445 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Cacna1aP97445 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cacna1aP97445 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cacna1aP97445 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Cacna1aP97445 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cacna1aP97445 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.02□□□□□ -0.32
Cacna1aP97445 Gm18905-201ENSMUST00000205454 928 ntBASIC13.02□□□□□ -0.32
Cacna1aP97445 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.02□□□□□ -0.32
Cacna1aP97445 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.02□□□□□ -0.32
Cacna1aP97445 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cacna1aP97445 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cacna1aP97445 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Cacna1aP97445 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.02□□□□□ -0.32
Cacna1aP97445 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cacna1aP97445 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cacna1aP97445 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Cacna1aP97445 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cacna1aP97445 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cacna1aP97445 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cacna1aP97445 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cacna1aP97445 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cacna1aP97445 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cacna1aP97445 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cacna1aP97445 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.02□□□□□ -0.33
Cacna1aP97445 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC13.02□□□□□ -0.33
Cacna1aP97445 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cacna1aP97445 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cacna1aP97445 Gm7287-201ENSMUST00000205267 602 ntBASIC13.02□□□□□ -0.33
Cacna1aP97445 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cacna1aP97445 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cacna1aP97445 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cacna1aP97445 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cacna1aP97445 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cacna1aP97445 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cacna1aP97445 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cacna1aP97445 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cacna1aP97445 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cacna1aP97445 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Cacna1aP97445 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cacna1aP97445 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cacna1aP97445 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cacna1aP97445 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Cacna1aP97445 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cacna1aP97445 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cacna1aP97445 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cacna1aP97445 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.01□□□□□ -0.33
Cacna1aP97445 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cacna1aP97445 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cacna1aP97445 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cacna1aP97445 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Cacna1aP97445 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.01□□□□□ -0.33
Cacna1aP97445 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC13.01□□□□□ -0.33
Cacna1aP97445 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.01□□□□□ -0.33
Cacna1aP97445 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.01□□□□□ -0.33
Cacna1aP97445 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cacna1aP97445 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cacna1aP97445 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cacna1aP97445 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cacna1aP97445 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cacna1aP97445 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cacna1aP97445 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cacna1aP97445 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cacna1aP97445 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cacna1aP97445 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Cacna1aP97445 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cacna1aP97445 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cacna1aP97445 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cacna1aP97445 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cacna1aP97445 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.01□□□□□ -0.33
Cacna1aP97445 Gm27514-201ENSMUST00000183692 110 ntBASIC13.01□□□□□ -0.33
Cacna1aP97445 Gm27839-201ENSMUST00000184242 106 ntBASIC13.01□□□□□ -0.33
Cacna1aP97445 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cacna1aP97445 Gm6983-201ENSMUST00000214912 628 ntBASIC13.01□□□□□ -0.33
Cacna1aP97445 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cacna1aP97445 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.01□□□□□ -0.33
Cacna1aP97445 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.01□□□□□ -0.33
Cacna1aP97445 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cacna1aP97445 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cacna1aP97445 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cacna1aP97445 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cacna1aP97445 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cacna1aP97445 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cacna1aP97445 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cacna1aP97445 Gm9252-201ENSMUST00000172364 1602 ntBASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms