Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Nkx2-3P97334 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Nkx2-3P97334 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC17.64■□□□□ 0.42
Nkx2-3P97334 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Nkx2-3P97334 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.64■□□□□ 0.42
Nkx2-3P97334 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-3P97334 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-3P97334 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-3P97334 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-3P97334 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-3P97334 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-3P97334 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Nkx2-3P97334 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC17.64■□□□□ 0.41
Nkx2-3P97334 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-3P97334 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC17.64■□□□□ 0.41
Nkx2-3P97334 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-3P97334 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-3P97334 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.64■□□□□ 0.41
Nkx2-3P97334 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Nkx2-3P97334 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Nkx2-3P97334 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Nkx2-3P97334 Zkscan14-203ENSMUST00000198959 2243 ntBASIC17.64■□□□□ 0.41
Nkx2-3P97334 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-3P97334 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-3P97334 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-3P97334 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-3P97334 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.64■□□□□ 0.41
Nkx2-3P97334 Gm12020-201ENSMUST00000119030 2042 ntBASIC17.64■□□□□ 0.41
Nkx2-3P97334 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-3P97334 Gm45504-201ENSMUST00000211407 2107 ntBASIC17.63■□□□□ 0.41
Nkx2-3P97334 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-3P97334 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-3P97334 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC17.63■□□□□ 0.41
Nkx2-3P97334 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-3P97334 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-3P97334 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-3P97334 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-3P97334 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC17.63■□□□□ 0.41
Nkx2-3P97334 Gm8810-201ENSMUST00000172895 754 ntBASIC17.63■□□□□ 0.41
Nkx2-3P97334 Gm29608-201ENSMUST00000190444 463 ntBASIC17.63■□□□□ 0.41
Nkx2-3P97334 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC17.63■□□□□ 0.41
Nkx2-3P97334 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC17.63■□□□□ 0.41
Nkx2-3P97334 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-3P97334 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-3P97334 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-3P97334 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-3P97334 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-3P97334 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-3P97334 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-3P97334 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-3P97334 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-3P97334 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-3P97334 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Nkx2-3P97334 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-3P97334 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-3P97334 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-3P97334 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-3P97334 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-3P97334 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-3P97334 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC17.62■□□□□ 0.41
Nkx2-3P97334 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-3P97334 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-3P97334 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-3P97334 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-3P97334 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC17.62■□□□□ 0.41
Nkx2-3P97334 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC17.62■□□□□ 0.41
Nkx2-3P97334 Gm29649-201ENSMUST00000185649 419 ntBASIC17.62■□□□□ 0.41
Nkx2-3P97334 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC17.62■□□□□ 0.41
Nkx2-3P97334 Gm38223-201ENSMUST00000194484 695 ntBASIC17.62■□□□□ 0.41
Nkx2-3P97334 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-3P97334 Gm38671-201ENSMUST00000200573 130 ntBASIC17.62■□□□□ 0.41
Nkx2-3P97334 Gm9299-201ENSMUST00000206392 1140 ntBASIC17.62■□□□□ 0.41
Nkx2-3P97334 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-3P97334 AC155237.1-201ENSMUST00000226196 1279 ntBASIC17.62■□□□□ 0.41
Nkx2-3P97334 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-3P97334 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-3P97334 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-3P97334 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-3P97334 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-3P97334 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-3P97334 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-3P97334 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-3P97334 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Nkx2-3P97334 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-3P97334 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-3P97334 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-3P97334 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-3P97334 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-3P97334 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-3P97334 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-3P97334 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC17.61■□□□□ 0.41
Nkx2-3P97334 Snora78-201ENSMUST00000158630 128 ntBASIC17.61■□□□□ 0.41
Nkx2-3P97334 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC17.61■□□□□ 0.41
Nkx2-3P97334 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Nkx2-3P97334 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-3P97334 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-3P97334 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC17.61■□□□□ 0.41
Nkx2-3P97334 AC166997.1-201ENSMUST00000225122 572 ntBASIC17.61■□□□□ 0.41
Nkx2-3P97334 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-3P97334 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms