Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cdh6P97326 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh6P97326 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cdh6P97326 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Cdh6P97326 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Cdh6P97326 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cdh6P97326 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh6P97326 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh6P97326 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh6P97326 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh6P97326 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh6P97326 Gm13453-201ENSMUST00000118708 357 ntBASIC14.33□□□□□ -0.12
Cdh6P97326 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh6P97326 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.33□□□□□ -0.12
Cdh6P97326 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.33□□□□□ -0.12
Cdh6P97326 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Cdh6P97326 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.33□□□□□ -0.12
Cdh6P97326 Gm17837-201ENSMUST00000186435 985 ntBASIC14.33□□□□□ -0.12
Cdh6P97326 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.33□□□□□ -0.12
Cdh6P97326 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh6P97326 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.33□□□□□ -0.12
Cdh6P97326 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh6P97326 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh6P97326 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Cdh6P97326 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh6P97326 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Cdh6P97326 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh6P97326 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh6P97326 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.33□□□□□ -0.12
Cdh6P97326 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cdh6P97326 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cdh6P97326 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cdh6P97326 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh6P97326 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh6P97326 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.33□□□□□ -0.12
Cdh6P97326 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh6P97326 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cdh6P97326 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh6P97326 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh6P97326 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh6P97326 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh6P97326 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh6P97326 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cdh6P97326 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh6P97326 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh6P97326 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh6P97326 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh6P97326 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh6P97326 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh6P97326 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cdh6P97326 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh6P97326 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cdh6P97326 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh6P97326 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh6P97326 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh6P97326 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh6P97326 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.32□□□□□ -0.12
Cdh6P97326 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.32□□□□□ -0.12
Cdh6P97326 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.32□□□□□ -0.12
Cdh6P97326 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh6P97326 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.32□□□□□ -0.12
Cdh6P97326 Gm44344-201ENSMUST00000200287 129 ntBASIC14.32□□□□□ -0.12
Cdh6P97326 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh6P97326 Gm46209-201ENSMUST00000217912 553 ntBASIC14.32□□□□□ -0.12
Cdh6P97326 Gm9229-201ENSMUST00000222777 126 ntBASIC14.32□□□□□ -0.12
Cdh6P97326 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh6P97326 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh6P97326 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cdh6P97326 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh6P97326 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh6P97326 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.32□□□□□ -0.12
Cdh6P97326 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh6P97326 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh6P97326 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Cdh6P97326 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh6P97326 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh6P97326 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Cdh6P97326 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh6P97326 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh6P97326 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.32□□□□□ -0.12
Cdh6P97326 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cdh6P97326 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh6P97326 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh6P97326 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh6P97326 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh6P97326 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Cdh6P97326 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cdh6P97326 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh6P97326 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.31□□□□□ -0.12
Cdh6P97326 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.31□□□□□ -0.12
Cdh6P97326 Gm38294-201ENSMUST00000192831 381 ntBASIC14.31□□□□□ -0.12
Cdh6P97326 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh6P97326 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh6P97326 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh6P97326 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh6P97326 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh6P97326 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.31□□□□□ -0.12
Cdh6P97326 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh6P97326 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
Cdh6P97326 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms