Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
PrkdcP97313 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC9.41□□□□□ -0.9
PrkdcP97313 Rmrp-201ENSMUST00000157463 271 ntBASIC9.41□□□□□ -0.9
PrkdcP97313 AL732506.1-201ENSMUST00000226420 281 ntBASIC9.41□□□□□ -0.9
PrkdcP97313 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PrkdcP97313 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
PrkdcP97313 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
PrkdcP97313 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
PrkdcP97313 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
PrkdcP97313 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
PrkdcP97313 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC9.4□□□□□ -0.9
PrkdcP97313 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
PrkdcP97313 Crry-ps-201ENSMUST00000079090 1309 ntBASIC9.4□□□□□ -0.9
PrkdcP97313 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
PrkdcP97313 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
PrkdcP97313 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
PrkdcP97313 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
PrkdcP97313 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
PrkdcP97313 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
PrkdcP97313 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC9.4□□□□□ -0.9
PrkdcP97313 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
PrkdcP97313 Gm14665-201ENSMUST00000122294 557 ntBASIC9.4□□□□□ -0.9
PrkdcP97313 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
PrkdcP97313 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
PrkdcP97313 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC9.4□□□□□ -0.9
PrkdcP97313 CT025551.1-201ENSMUST00000223996 692 ntBASIC9.4□□□□□ -0.9
PrkdcP97313 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
PrkdcP97313 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
PrkdcP97313 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC9.4□□□□□ -0.91
PrkdcP97313 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
PrkdcP97313 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
PrkdcP97313 Gm13045-201ENSMUST00000119019 712 ntBASIC9.4□□□□□ -0.91
PrkdcP97313 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC9.4□□□□□ -0.91
PrkdcP97313 Gm8365-201ENSMUST00000197334 648 ntBASIC9.4□□□□□ -0.91
PrkdcP97313 Gm9555-201ENSMUST00000200908 583 ntBASIC9.4□□□□□ -0.91
PrkdcP97313 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.91
PrkdcP97313 Gm30285-201ENSMUST00000214614 422 ntBASIC9.4□□□□□ -0.91
PrkdcP97313 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
PrkdcP97313 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
PrkdcP97313 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
PrkdcP97313 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
PrkdcP97313 AC139054.1-201ENSMUST00000226898 1598 ntBASIC9.4□□□□□ -0.91
PrkdcP97313 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC9.4□□□□□ -0.91
PrkdcP97313 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC9.4□□□□□ -0.91
PrkdcP97313 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PrkdcP97313 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PrkdcP97313 Gm19221-201ENSMUST00000221827 1477 ntBASIC9.39□□□□□ -0.91
PrkdcP97313 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PrkdcP97313 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PrkdcP97313 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PrkdcP97313 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PrkdcP97313 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PrkdcP97313 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
PrkdcP97313 Gm17391-201ENSMUST00000171036 126 ntBASIC9.39□□□□□ -0.91
PrkdcP97313 Gm8856-201ENSMUST00000185254 1144 ntBASIC9.39□□□□□ -0.91
PrkdcP97313 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PrkdcP97313 Gm7600-201ENSMUST00000209657 785 ntBASIC9.39□□□□□ -0.91
PrkdcP97313 Gm17330-201ENSMUST00000221047 165 ntBASIC9.39□□□□□ -0.91
PrkdcP97313 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PrkdcP97313 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PrkdcP97313 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PrkdcP97313 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
PrkdcP97313 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PrkdcP97313 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PrkdcP97313 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
PrkdcP97313 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PrkdcP97313 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PrkdcP97313 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PrkdcP97313 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PrkdcP97313 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PrkdcP97313 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC9.39□□□□□ -0.91
PrkdcP97313 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PrkdcP97313 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PrkdcP97313 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
PrkdcP97313 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC9.39□□□□□ -0.91
PrkdcP97313 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC9.39□□□□□ -0.91
PrkdcP97313 Gm19163-201ENSMUST00000223313 780 ntBASIC9.39□□□□□ -0.91
PrkdcP97313 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PrkdcP97313 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PrkdcP97313 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
PrkdcP97313 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PrkdcP97313 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
PrkdcP97313 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PrkdcP97313 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC9.39□□□□□ -0.91
PrkdcP97313 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PrkdcP97313 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
PrkdcP97313 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC9.39□□□□□ -0.91
PrkdcP97313 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
PrkdcP97313 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC9.39□□□□□ -0.91
PrkdcP97313 Gm10051-201ENSMUST00000145209 414 ntBASIC9.39□□□□□ -0.91
PrkdcP97313 Gm29741-201ENSMUST00000192667 421 ntBASIC9.39□□□□□ -0.91
PrkdcP97313 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PrkdcP97313 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
PrkdcP97313 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC9.39□□□□□ -0.91
PrkdcP97313 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PrkdcP97313 Gm16011-201ENSMUST00000121567 2662 ntBASIC9.39□□□□□ -0.91
PrkdcP97313 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PrkdcP97313 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC9.38□□□□□ -0.91
PrkdcP97313 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC9.38□□□□□ -0.91
PrkdcP97313 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms