Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim43cP86449 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15.38■□□□□ 0.05
Trim43cP86449 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim43cP86449 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim43cP86449 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim43cP86449 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trim43cP86449 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.38■□□□□ 0.05
Trim43cP86449 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.38■□□□□ 0.05
Trim43cP86449 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim43cP86449 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim43cP86449 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim43cP86449 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim43cP86449 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim43cP86449 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim43cP86449 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim43cP86449 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
Trim43cP86449 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim43cP86449 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim43cP86449 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
Trim43cP86449 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim43cP86449 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC15.37■□□□□ 0.05
Trim43cP86449 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim43cP86449 Gm27680-201ENSMUST00000184192 160 ntBASIC15.37■□□□□ 0.05
Trim43cP86449 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.37■□□□□ 0.05
Trim43cP86449 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Trim43cP86449 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Trim43cP86449 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim43cP86449 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim43cP86449 Gm5867-201ENSMUST00000063197 592 ntBASIC15.37■□□□□ 0.05
Trim43cP86449 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim43cP86449 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim43cP86449 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim43cP86449 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim43cP86449 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.37■□□□□ 0.05
Trim43cP86449 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trim43cP86449 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim43cP86449 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim43cP86449 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim43cP86449 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim43cP86449 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
Trim43cP86449 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.37■□□□□ 0.05
Trim43cP86449 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC15.36■□□□□ 0.05
Trim43cP86449 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim43cP86449 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trim43cP86449 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim43cP86449 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim43cP86449 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC15.36■□□□□ 0.05
Trim43cP86449 AC159196.2-201ENSMUST00000224082 1622 ntBASIC15.36■□□□□ 0.05
Trim43cP86449 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim43cP86449 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim43cP86449 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim43cP86449 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim43cP86449 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.36■□□□□ 0.05
Trim43cP86449 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trim43cP86449 Gm15653-201ENSMUST00000119247 907 ntBASIC15.36■□□□□ 0.05
Trim43cP86449 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC15.36■□□□□ 0.05
Trim43cP86449 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim43cP86449 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim43cP86449 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim43cP86449 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim43cP86449 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC15.36■□□□□ 0.05
Trim43cP86449 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trim43cP86449 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim43cP86449 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC15.36■□□□□ 0.05
Trim43cP86449 Gm15889-202ENSMUST00000212669 2443 ntBASIC15.36■□□□□ 0.05
Trim43cP86449 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim43cP86449 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim43cP86449 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim43cP86449 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim43cP86449 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim43cP86449 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim43cP86449 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trim43cP86449 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trim43cP86449 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim43cP86449 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trim43cP86449 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim43cP86449 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim43cP86449 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim43cP86449 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim43cP86449 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trim43cP86449 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Trim43cP86449 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC15.35■□□□□ 0.05
Trim43cP86449 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim43cP86449 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trim43cP86449 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC15.35■□□□□ 0.05
Trim43cP86449 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trim43cP86449 Gm27306-201ENSMUST00000183970 107 ntBASIC15.35■□□□□ 0.05
Trim43cP86449 AC131690.1-201ENSMUST00000218406 374 ntBASIC15.35■□□□□ 0.05
Trim43cP86449 Gm7775-201ENSMUST00000218871 853 ntBASIC15.35■□□□□ 0.05
Trim43cP86449 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.35■□□□□ 0.05
Trim43cP86449 AC154806.6-201ENSMUST00000228192 202 ntBASIC15.35■□□□□ 0.05
Trim43cP86449 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Trim43cP86449 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim43cP86449 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim43cP86449 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trim43cP86449 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim43cP86449 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim43cP86449 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trim43cP86449 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim43cP86449 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms