Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CiitaP79621 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CiitaP79621 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CiitaP79621 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CiitaP79621 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CiitaP79621 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CiitaP79621 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CiitaP79621 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CiitaP79621 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CiitaP79621 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CiitaP79621 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
CiitaP79621 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CiitaP79621 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC15.28■□□□□ 0.04
CiitaP79621 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC15.28■□□□□ 0.04
CiitaP79621 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC15.28■□□□□ 0.04
CiitaP79621 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CiitaP79621 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CiitaP79621 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CiitaP79621 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC15.28■□□□□ 0.04
CiitaP79621 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CiitaP79621 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CiitaP79621 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CiitaP79621 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CiitaP79621 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CiitaP79621 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CiitaP79621 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CiitaP79621 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CiitaP79621 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CiitaP79621 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CiitaP79621 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CiitaP79621 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CiitaP79621 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CiitaP79621 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.27■□□□□ 0.04
CiitaP79621 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CiitaP79621 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CiitaP79621 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CiitaP79621 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CiitaP79621 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CiitaP79621 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CiitaP79621 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC15.27■□□□□ 0.04
CiitaP79621 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CiitaP79621 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC15.27■□□□□ 0.04
CiitaP79621 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CiitaP79621 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC15.27■□□□□ 0.04
CiitaP79621 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CiitaP79621 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CiitaP79621 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CiitaP79621 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CiitaP79621 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CiitaP79621 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CiitaP79621 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CiitaP79621 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CiitaP79621 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
CiitaP79621 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CiitaP79621 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.03
CiitaP79621 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CiitaP79621 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CiitaP79621 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CiitaP79621 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CiitaP79621 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CiitaP79621 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CiitaP79621 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CiitaP79621 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CiitaP79621 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CiitaP79621 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
CiitaP79621 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CiitaP79621 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.26■□□□□ 0.03
CiitaP79621 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CiitaP79621 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.26■□□□□ 0.03
CiitaP79621 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CiitaP79621 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CiitaP79621 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
CiitaP79621 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CiitaP79621 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CiitaP79621 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CiitaP79621 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CiitaP79621 Gm9347-201ENSMUST00000211473 1607 ntBASIC15.26■□□□□ 0.03
CiitaP79621 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CiitaP79621 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CiitaP79621 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CiitaP79621 Gm14928-201ENSMUST00000120198 477 ntBASIC15.26■□□□□ 0.03
CiitaP79621 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC15.26■□□□□ 0.03
CiitaP79621 Gm5279-201ENSMUST00000199575 745 ntBASIC15.26■□□□□ 0.03
CiitaP79621 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC15.26■□□□□ 0.03
CiitaP79621 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CiitaP79621 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CiitaP79621 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CiitaP79621 Gm15823-201ENSMUST00000064305 670 ntBASIC15.26■□□□□ 0.03
CiitaP79621 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CiitaP79621 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CiitaP79621 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CiitaP79621 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CiitaP79621 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CiitaP79621 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CiitaP79621 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CiitaP79621 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC15.26■□□□□ 0.03
CiitaP79621 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CiitaP79621 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CiitaP79621 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CiitaP79621 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms