Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.97□□□□□ -0.17
Shox2P70390 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Shox2P70390 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shox2P70390 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.97□□□□□ -0.17
Shox2P70390 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Shox2P70390 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.97□□□□□ -0.17
Shox2P70390 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.97□□□□□ -0.17
Shox2P70390 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Shox2P70390 Gm2445-201ENSMUST00000182798 989 ntBASIC13.97□□□□□ -0.17
Shox2P70390 Gm27742-201ENSMUST00000184667 60 ntBASIC13.97□□□□□ -0.17
Shox2P70390 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.97□□□□□ -0.17
Shox2P70390 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.97□□□□□ -0.17
Shox2P70390 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.97□□□□□ -0.17
Shox2P70390 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Shox2P70390 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.97□□□□□ -0.17
Shox2P70390 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shox2P70390 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shox2P70390 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Shox2P70390 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Shox2P70390 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Shox2P70390 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shox2P70390 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Shox2P70390 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shox2P70390 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Shox2P70390 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shox2P70390 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Shox2P70390 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.97□□□□□ -0.17
Shox2P70390 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.97□□□□□ -0.17
Shox2P70390 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.97□□□□□ -0.17
Shox2P70390 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Shox2P70390 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.96□□□□□ -0.17
Shox2P70390 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shox2P70390 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Shox2P70390 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Shox2P70390 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Shox2P70390 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shox2P70390 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shox2P70390 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Shox2P70390 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shox2P70390 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Shox2P70390 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Shox2P70390 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shox2P70390 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.96□□□□□ -0.17
Shox2P70390 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shox2P70390 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Shox2P70390 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Shox2P70390 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shox2P70390 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.96□□□□□ -0.17
Shox2P70390 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shox2P70390 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC13.96□□□□□ -0.17
Shox2P70390 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Shox2P70390 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Shox2P70390 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Shox2P70390 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC13.96□□□□□ -0.17
Shox2P70390 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.96□□□□□ -0.17
Shox2P70390 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC13.96□□□□□ -0.17
Shox2P70390 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.96□□□□□ -0.17
Shox2P70390 Gm18246-201ENSMUST00000221023 728 ntBASIC13.96□□□□□ -0.17
Shox2P70390 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Shox2P70390 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Shox2P70390 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shox2P70390 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shox2P70390 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Shox2P70390 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shox2P70390 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shox2P70390 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shox2P70390 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
Shox2P70390 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Shox2P70390 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Shox2P70390 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Shox2P70390 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Shox2P70390 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Shox2P70390 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Shox2P70390 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Shox2P70390 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shox2P70390 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shox2P70390 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shox2P70390 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.95□□□□□ -0.18
Shox2P70390 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.95□□□□□ -0.18
Shox2P70390 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shox2P70390 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shox2P70390 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shox2P70390 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shox2P70390 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shox2P70390 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shox2P70390 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shox2P70390 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shox2P70390 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Shox2P70390 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Shox2P70390 Gm5682-201ENSMUST00000173402 505 ntBASIC13.95□□□□□ -0.18
Shox2P70390 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Shox2P70390 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.95□□□□□ -0.18
Shox2P70390 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shox2P70390 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shox2P70390 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Shox2P70390 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Shox2P70390 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shox2P70390 Rubie-203ENSMUST00000227803 2430 ntBASIC13.95□□□□□ -0.18
Shox2P70390 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shox2P70390 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms