Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim4P70271 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim4P70271 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim4P70271 Gm43509-201ENSMUST00000196551 2594 ntBASIC11.79□□□□□ -0.52
Pdlim4P70271 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim4P70271 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim4P70271 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim4P70271 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim4P70271 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim4P70271 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim4P70271 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim4P70271 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim4P70271 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim4P70271 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim4P70271 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim4P70271 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Pdlim4P70271 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Pdlim4P70271 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC11.79□□□□□ -0.52
Pdlim4P70271 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim4P70271 Gm13517-201ENSMUST00000120782 1495 ntBASIC11.79□□□□□ -0.52
Pdlim4P70271 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Pdlim4P70271 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim4P70271 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC11.79□□□□□ -0.52
Pdlim4P70271 Gm25948-201ENSMUST00000175334 112 ntBASIC11.79□□□□□ -0.52
Pdlim4P70271 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim4P70271 AC124732.2-201ENSMUST00000221977 316 ntBASIC11.79□□□□□ -0.52
Pdlim4P70271 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.79□□□□□ -0.52
Pdlim4P70271 AC155729.1-201ENSMUST00000227758 544 ntBASIC11.79□□□□□ -0.52
Pdlim4P70271 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim4P70271 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim4P70271 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC11.79□□□□□ -0.52
Pdlim4P70271 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim4P70271 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Pdlim4P70271 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim4P70271 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Pdlim4P70271 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Pdlim4P70271 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC11.79□□□□□ -0.52
Pdlim4P70271 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim4P70271 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim4P70271 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim4P70271 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim4P70271 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim4P70271 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim4P70271 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim4P70271 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Pdlim4P70271 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim4P70271 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim4P70271 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim4P70271 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim4P70271 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC11.78□□□□□ -0.52
Pdlim4P70271 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC11.78□□□□□ -0.52
Pdlim4P70271 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.78□□□□□ -0.52
Pdlim4P70271 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim4P70271 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim4P70271 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim4P70271 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim4P70271 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim4P70271 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Pdlim4P70271 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim4P70271 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Pdlim4P70271 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim4P70271 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim4P70271 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Pdlim4P70271 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim4P70271 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim4P70271 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim4P70271 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim4P70271 Gm8410-201ENSMUST00000117225 605 ntBASIC11.78□□□□□ -0.52
Pdlim4P70271 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim4P70271 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC11.78□□□□□ -0.52
Pdlim4P70271 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim4P70271 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim4P70271 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Pdlim4P70271 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim4P70271 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.78□□□□□ -0.52
Pdlim4P70271 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Pdlim4P70271 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim4P70271 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim4P70271 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC11.78□□□□□ -0.52
Pdlim4P70271 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim4P70271 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim4P70271 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.78□□□□□ -0.52
Pdlim4P70271 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Pdlim4P70271 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim4P70271 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.78□□□□□ -0.52
Pdlim4P70271 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.78□□□□□ -0.52
Pdlim4P70271 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pdlim4P70271 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pdlim4P70271 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Pdlim4P70271 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pdlim4P70271 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.77□□□□□ -0.52
Pdlim4P70271 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pdlim4P70271 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC11.77□□□□□ -0.52
Pdlim4P70271 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Pdlim4P70271 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pdlim4P70271 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pdlim4P70271 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC11.77□□□□□ -0.53
Pdlim4P70271 Gm13015-201ENSMUST00000118674 204 ntBASIC11.77□□□□□ -0.53
Pdlim4P70271 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC11.77□□□□□ -0.53
Pdlim4P70271 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms