Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ThraP63058 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ThraP63058 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ThraP63058 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ThraP63058 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ThraP63058 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ThraP63058 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ThraP63058 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ThraP63058 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ThraP63058 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.34□□□□□ -0.11
ThraP63058 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ThraP63058 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ThraP63058 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ThraP63058 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ThraP63058 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.34□□□□□ -0.11
ThraP63058 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ThraP63058 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ThraP63058 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.34□□□□□ -0.11
ThraP63058 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.34□□□□□ -0.11
ThraP63058 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ThraP63058 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ThraP63058 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ThraP63058 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ThraP63058 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ThraP63058 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.34□□□□□ -0.11
ThraP63058 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ThraP63058 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ThraP63058 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ThraP63058 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.34□□□□□ -0.11
ThraP63058 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
ThraP63058 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ThraP63058 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ThraP63058 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
ThraP63058 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
ThraP63058 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ThraP63058 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ThraP63058 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ThraP63058 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ThraP63058 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
ThraP63058 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ThraP63058 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ThraP63058 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ThraP63058 Gm12428-201ENSMUST00000119844 727 ntBASIC14.33□□□□□ -0.12
ThraP63058 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
ThraP63058 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.33□□□□□ -0.12
ThraP63058 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.33□□□□□ -0.12
ThraP63058 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.33□□□□□ -0.12
ThraP63058 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ThraP63058 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ThraP63058 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.33□□□□□ -0.12
ThraP63058 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ThraP63058 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ThraP63058 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.33□□□□□ -0.12
ThraP63058 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.33□□□□□ -0.12
ThraP63058 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ThraP63058 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ThraP63058 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ThraP63058 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ThraP63058 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.32□□□□□ -0.12
ThraP63058 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ThraP63058 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.32□□□□□ -0.12
ThraP63058 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ThraP63058 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ThraP63058 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ThraP63058 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ThraP63058 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.32□□□□□ -0.12
ThraP63058 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ThraP63058 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ThraP63058 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ThraP63058 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ThraP63058 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ThraP63058 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ThraP63058 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.32□□□□□ -0.12
ThraP63058 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ThraP63058 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ThraP63058 Gm13015-201ENSMUST00000118674 204 ntBASIC14.32□□□□□ -0.12
ThraP63058 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.32□□□□□ -0.12
ThraP63058 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
ThraP63058 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.32□□□□□ -0.12
ThraP63058 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ThraP63058 Mir6977-201ENSMUST00000184960 64 ntBASIC14.32□□□□□ -0.12
ThraP63058 Gm38294-201ENSMUST00000192831 381 ntBASIC14.32□□□□□ -0.12
ThraP63058 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ThraP63058 Gm18049-201ENSMUST00000208909 581 ntBASIC14.32□□□□□ -0.12
ThraP63058 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ThraP63058 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ThraP63058 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
ThraP63058 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ThraP63058 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
ThraP63058 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
ThraP63058 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ThraP63058 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
ThraP63058 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ThraP63058 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ThraP63058 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
ThraP63058 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ThraP63058 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ThraP63058 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ThraP63058 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.32□□□□□ -0.12
ThraP63058 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms