Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ybx1P62960 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.45□□□□□ -0.1
Ybx1P62960 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.45□□□□□ -0.1
Ybx1P62960 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.45□□□□□ -0.1
Ybx1P62960 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ybx1P62960 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ybx1P62960 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ybx1P62960 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14.45□□□□□ -0.1
Ybx1P62960 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ybx1P62960 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.45□□□□□ -0.1
Ybx1P62960 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.45□□□□□ -0.1
Ybx1P62960 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ybx1P62960 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ybx1P62960 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ybx1P62960 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ybx1P62960 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ybx1P62960 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ybx1P62960 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ybx1P62960 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ybx1P62960 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ybx1P62960 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ybx1P62960 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ybx1P62960 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ybx1P62960 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ybx1P62960 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ybx1P62960 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ybx1P62960 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ybx1P62960 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ybx1P62960 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ybx1P62960 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ybx1P62960 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ybx1P62960 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ybx1P62960 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.44□□□□□ -0.1
Ybx1P62960 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ybx1P62960 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ybx1P62960 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.44□□□□□ -0.1
Ybx1P62960 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ybx1P62960 Gm4804-201ENSMUST00000182234 999 ntBASIC14.44□□□□□ -0.1
Ybx1P62960 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.44□□□□□ -0.1
Ybx1P62960 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.44□□□□□ -0.1
Ybx1P62960 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.44□□□□□ -0.1
Ybx1P62960 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.44□□□□□ -0.1
Ybx1P62960 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ybx1P62960 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ybx1P62960 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ybx1P62960 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ybx1P62960 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ybx1P62960 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Ybx1P62960 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ybx1P62960 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ybx1P62960 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ybx1P62960 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ybx1P62960 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ybx1P62960 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ybx1P62960 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.44□□□□□ -0.1
Ybx1P62960 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ybx1P62960 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ybx1P62960 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Ybx1P62960 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ybx1P62960 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ybx1P62960 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ybx1P62960 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ybx1P62960 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ybx1P62960 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ybx1P62960 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ybx1P62960 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.43□□□□□ -0.1
Ybx1P62960 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Ybx1P62960 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ybx1P62960 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ybx1P62960 Gm4984-201ENSMUST00000115987 360 ntBASIC14.43□□□□□ -0.1
Ybx1P62960 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ybx1P62960 AY702102-202ENSMUST00000194651 1173 ntBASIC14.43□□□□□ -0.1
Ybx1P62960 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.43□□□□□ -0.1
Ybx1P62960 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.43□□□□□ -0.1
Ybx1P62960 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ybx1P62960 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ybx1P62960 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ybx1P62960 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Ybx1P62960 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ybx1P62960 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Ybx1P62960 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ybx1P62960 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ybx1P62960 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ybx1P62960 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ybx1P62960 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ybx1P62960 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.43□□□□□ -0.1
Ybx1P62960 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ybx1P62960 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ybx1P62960 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ybx1P62960 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
Ybx1P62960 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ybx1P62960 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ybx1P62960 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ybx1P62960 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ybx1P62960 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ybx1P62960 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ybx1P62960 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ybx1P62960 Gm15240-201ENSMUST00000118156 720 ntBASIC14.42□□□□□ -0.1
Ybx1P62960 Gm12134-201ENSMUST00000122109 520 ntBASIC14.42□□□□□ -0.1
Ybx1P62960 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms