Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gm12669-201ENSMUST00000122162 1009 ntBASIC12.87□□□□□ -0.35
Lsm3P62311 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Lsm3P62311 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.87□□□□□ -0.35
Lsm3P62311 Gm8655-201ENSMUST00000221159 852 ntBASIC12.87□□□□□ -0.35
Lsm3P62311 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm3P62311 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm3P62311 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm3P62311 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm3P62311 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm3P62311 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.87□□□□□ -0.35
Lsm3P62311 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm3P62311 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.87□□□□□ -0.35
Lsm3P62311 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm3P62311 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.87□□□□□ -0.35
Lsm3P62311 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm3P62311 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Lsm3P62311 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm3P62311 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Lsm3P62311 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.86□□□□□ -0.35
Lsm3P62311 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm3P62311 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.86□□□□□ -0.35
Lsm3P62311 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm3P62311 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm3P62311 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm3P62311 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm3P62311 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm3P62311 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm3P62311 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Lsm3P62311 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm3P62311 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm3P62311 Gm10013-201ENSMUST00000106074 672 ntBASIC12.86□□□□□ -0.35
Lsm3P62311 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.86□□□□□ -0.35
Lsm3P62311 Gm11950-201ENSMUST00000121615 838 ntBASIC12.86□□□□□ -0.35
Lsm3P62311 Gm27867-201ENSMUST00000184778 125 ntBASIC12.86□□□□□ -0.35
Lsm3P62311 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Lsm3P62311 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.86□□□□□ -0.35
Lsm3P62311 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm3P62311 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Lsm3P62311 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm3P62311 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm3P62311 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm3P62311 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.86□□□□□ -0.35
Lsm3P62311 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Lsm3P62311 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm3P62311 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm3P62311 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm3P62311 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm3P62311 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.86□□□□□ -0.35
Lsm3P62311 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm3P62311 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.86□□□□□ -0.35
Lsm3P62311 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm3P62311 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm3P62311 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Lsm3P62311 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm3P62311 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm3P62311 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm3P62311 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm3P62311 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Lsm3P62311 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm3P62311 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Lsm3P62311 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm3P62311 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm3P62311 Gm15165-201ENSMUST00000118140 502 ntBASIC12.85□□□□□ -0.35
Lsm3P62311 Gm14042-201ENSMUST00000120139 833 ntBASIC12.85□□□□□ -0.35
Lsm3P62311 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm3P62311 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.85□□□□□ -0.35
Lsm3P62311 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm3P62311 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Lsm3P62311 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC12.85□□□□□ -0.35
Lsm3P62311 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm3P62311 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.85□□□□□ -0.35
Lsm3P62311 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm3P62311 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm3P62311 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Lsm3P62311 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm3P62311 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm3P62311 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm3P62311 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.85□□□□□ -0.35
Lsm3P62311 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Lsm3P62311 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm3P62311 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm3P62311 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm3P62311 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm3P62311 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm3P62311 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm3P62311 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm3P62311 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm3P62311 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Lsm3P62311 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm3P62311 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm3P62311 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm3P62311 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm3P62311 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Lsm3P62311 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm3P62311 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm3P62311 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm3P62311 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm3P62311 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm3P62311 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Lsm3P62311 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms