Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nphp4P59240 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nphp4P59240 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nphp4P59240 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nphp4P59240 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nphp4P59240 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC18.96■□□□□ 0.63
Nphp4P59240 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nphp4P59240 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.62
Nphp4P59240 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC18.95■□□□□ 0.62
Nphp4P59240 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nphp4P59240 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nphp4P59240 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nphp4P59240 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nphp4P59240 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
Nphp4P59240 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Nphp4P59240 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC18.95■□□□□ 0.62
Nphp4P59240 Gm13886-201ENSMUST00000117876 1183 ntBASIC18.95■□□□□ 0.62
Nphp4P59240 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Nphp4P59240 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC18.95■□□□□ 0.62
Nphp4P59240 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Nphp4P59240 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nphp4P59240 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nphp4P59240 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nphp4P59240 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nphp4P59240 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Nphp4P59240 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Nphp4P59240 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nphp4P59240 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Nphp4P59240 AC131068.2-201ENSMUST00000226175 1453 ntBASIC18.95■□□□□ 0.62
Nphp4P59240 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Nphp4P59240 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nphp4P59240 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nphp4P59240 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Nphp4P59240 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nphp4P59240 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC18.95■□□□□ 0.62
Nphp4P59240 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nphp4P59240 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Nphp4P59240 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nphp4P59240 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nphp4P59240 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.94■□□□□ 0.62
Nphp4P59240 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nphp4P59240 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nphp4P59240 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Nphp4P59240 Gm14660-201ENSMUST00000119809 575 ntBASIC18.94■□□□□ 0.62
Nphp4P59240 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nphp4P59240 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC18.94■□□□□ 0.62
Nphp4P59240 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC18.94■□□□□ 0.62
Nphp4P59240 AC166349.1-201ENSMUST00000220866 695 ntBASIC18.94■□□□□ 0.62
Nphp4P59240 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nphp4P59240 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nphp4P59240 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nphp4P59240 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nphp4P59240 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Nphp4P59240 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nphp4P59240 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nphp4P59240 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nphp4P59240 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nphp4P59240 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nphp4P59240 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nphp4P59240 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nphp4P59240 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nphp4P59240 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Nphp4P59240 Gm45760-201ENSMUST00000212190 1782 ntBASIC18.93■□□□□ 0.62
Nphp4P59240 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nphp4P59240 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nphp4P59240 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
Nphp4P59240 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC18.93■□□□□ 0.62
Nphp4P59240 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC18.93■□□□□ 0.62
Nphp4P59240 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nphp4P59240 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Nphp4P59240 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nphp4P59240 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nphp4P59240 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Nphp4P59240 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nphp4P59240 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nphp4P59240 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nphp4P59240 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nphp4P59240 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nphp4P59240 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nphp4P59240 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nphp4P59240 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nphp4P59240 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nphp4P59240 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nphp4P59240 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Nphp4P59240 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nphp4P59240 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nphp4P59240 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nphp4P59240 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Nphp4P59240 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nphp4P59240 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nphp4P59240 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC18.92■□□□□ 0.62
Nphp4P59240 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC18.92■□□□□ 0.62
Nphp4P59240 Mir1982-201ENSMUST00000157368 74 ntBASIC18.92■□□□□ 0.62
Nphp4P59240 Snora78-201ENSMUST00000158630 128 ntBASIC18.92■□□□□ 0.62
Nphp4P59240 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC18.92■□□□□ 0.62
Nphp4P59240 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Nphp4P59240 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nphp4P59240 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nphp4P59240 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nphp4P59240 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms