Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup43P59235 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup43P59235 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup43P59235 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Nup43P59235 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup43P59235 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup43P59235 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup43P59235 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nup43P59235 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nup43P59235 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup43P59235 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Nup43P59235 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup43P59235 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup43P59235 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup43P59235 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nup43P59235 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup43P59235 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.36□□□□□ -0.27
Nup43P59235 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Nup43P59235 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Nup43P59235 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup43P59235 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup43P59235 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.36□□□□□ -0.27
Nup43P59235 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.35□□□□□ -0.27
Nup43P59235 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nup43P59235 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.35□□□□□ -0.27
Nup43P59235 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.35□□□□□ -0.27
Nup43P59235 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Nup43P59235 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup43P59235 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nup43P59235 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nup43P59235 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup43P59235 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup43P59235 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup43P59235 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nup43P59235 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup43P59235 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup43P59235 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup43P59235 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Nup43P59235 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nup43P59235 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup43P59235 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Nup43P59235 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.35□□□□□ -0.27
Nup43P59235 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup43P59235 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.35□□□□□ -0.27
Nup43P59235 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.35□□□□□ -0.27
Nup43P59235 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Nup43P59235 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Nup43P59235 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Nup43P59235 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Nup43P59235 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Nup43P59235 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup43P59235 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup43P59235 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Nup43P59235 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Nup43P59235 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Nup43P59235 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup43P59235 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup43P59235 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup43P59235 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup43P59235 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Nup43P59235 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nup43P59235 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup43P59235 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup43P59235 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup43P59235 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup43P59235 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.34□□□□□ -0.27
Nup43P59235 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup43P59235 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nup43P59235 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nup43P59235 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nup43P59235 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup43P59235 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup43P59235 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
Nup43P59235 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nup43P59235 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup43P59235 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Nup43P59235 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup43P59235 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nup43P59235 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nup43P59235 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.34□□□□□ -0.27
Nup43P59235 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.34□□□□□ -0.27
Nup43P59235 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.34□□□□□ -0.27
Nup43P59235 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup43P59235 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup43P59235 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Nup43P59235 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup43P59235 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Nup43P59235 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup43P59235 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup43P59235 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Nup43P59235 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup43P59235 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup43P59235 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup43P59235 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.34□□□□□ -0.27
Nup43P59235 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Nup43P59235 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup43P59235 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.34□□□□□ -0.27
Nup43P59235 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup43P59235 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup43P59235 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms