Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.22■□□□□ 0.03
Nub1P54729 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nub1P54729 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Nub1P54729 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nub1P54729 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nub1P54729 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nub1P54729 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nub1P54729 Gm12428-201ENSMUST00000119844 727 ntBASIC15.22■□□□□ 0.03
Nub1P54729 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nub1P54729 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.22■□□□□ 0.03
Nub1P54729 Dupd1-202ENSMUST00000224735 548 ntBASIC15.22■□□□□ 0.03
Nub1P54729 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nub1P54729 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nub1P54729 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nub1P54729 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nub1P54729 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nub1P54729 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nub1P54729 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nub1P54729 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nub1P54729 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Nub1P54729 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Nub1P54729 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.22■□□□□ 0.03
Nub1P54729 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nub1P54729 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.22■□□□□ 0.03
Nub1P54729 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nub1P54729 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.21■□□□□ 0.03
Nub1P54729 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nub1P54729 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nub1P54729 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nub1P54729 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15.21■□□□□ 0.03
Nub1P54729 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nub1P54729 Gm45751-201ENSMUST00000210185 1573 ntBASIC15.21■□□□□ 0.03
Nub1P54729 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nub1P54729 Gm24543-201ENSMUST00000103867 82 ntBASIC15.21■□□□□ 0.03
Nub1P54729 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC15.21■□□□□ 0.03
Nub1P54729 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nub1P54729 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC15.21■□□□□ 0.03
Nub1P54729 Gm27533-201ENSMUST00000183800 152 ntBASIC15.21■□□□□ 0.03
Nub1P54729 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.21■□□□□ 0.03
Nub1P54729 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Nub1P54729 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC15.21■□□□□ 0.03
Nub1P54729 Gm16476-201ENSMUST00000221544 139 ntBASIC15.21■□□□□ 0.03
Nub1P54729 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nub1P54729 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Nub1P54729 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.21■□□□□ 0.03
Nub1P54729 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nub1P54729 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Nub1P54729 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nub1P54729 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Nub1P54729 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nub1P54729 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Nub1P54729 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nub1P54729 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Nub1P54729 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nub1P54729 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nub1P54729 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nub1P54729 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nub1P54729 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Nub1P54729 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nub1P54729 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nub1P54729 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nub1P54729 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nub1P54729 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC15.2■□□□□ 0.02
Nub1P54729 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nub1P54729 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nub1P54729 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nub1P54729 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nub1P54729 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nub1P54729 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nub1P54729 Mir6956-201ENSMUST00000183598 62 ntBASIC15.2■□□□□ 0.02
Nub1P54729 AA619741-201ENSMUST00000195095 646 ntBASIC15.2■□□□□ 0.02
Nub1P54729 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Nub1P54729 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nub1P54729 Shd-206ENSMUST00000225145 998 ntBASIC15.2■□□□□ 0.02
Nub1P54729 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nub1P54729 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Nub1P54729 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Nub1P54729 Mir125a-201ENSMUST00000083545 68 ntBASIC15.2■□□□□ 0.02
Nub1P54729 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.2■□□□□ 0.02
Nub1P54729 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nub1P54729 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nub1P54729 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nub1P54729 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nub1P54729 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Nub1P54729 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nub1P54729 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC15.2■□□□□ 0.02
Nub1P54729 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nub1P54729 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nub1P54729 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Nub1P54729 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nub1P54729 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nub1P54729 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nub1P54729 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Nub1P54729 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nub1P54729 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Nub1P54729 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nub1P54729 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nub1P54729 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nub1P54729 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Nub1P54729 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms