Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atxn1P54254 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Atxn1P54254 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atxn1P54254 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atxn1P54254 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atxn1P54254 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.03□□□□□ -0.16
Atxn1P54254 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atxn1P54254 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atxn1P54254 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atxn1P54254 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atxn1P54254 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Atxn1P54254 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atxn1P54254 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atxn1P54254 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atxn1P54254 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atxn1P54254 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Atxn1P54254 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Atxn1P54254 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atxn1P54254 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atxn1P54254 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atxn1P54254 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atxn1P54254 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Atxn1P54254 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atxn1P54254 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atxn1P54254 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Atxn1P54254 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Atxn1P54254 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atxn1P54254 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.02□□□□□ -0.16
Atxn1P54254 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atxn1P54254 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Atxn1P54254 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atxn1P54254 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atxn1P54254 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Atxn1P54254 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Atxn1P54254 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Atxn1P54254 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Atxn1P54254 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atxn1P54254 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atxn1P54254 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atxn1P54254 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.02□□□□□ -0.16
Atxn1P54254 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC14.02□□□□□ -0.17
Atxn1P54254 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Atxn1P54254 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atxn1P54254 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Atxn1P54254 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.02□□□□□ -0.17
Atxn1P54254 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atxn1P54254 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Atxn1P54254 Gm5354-201ENSMUST00000182417 973 ntBASIC14.02□□□□□ -0.17
Atxn1P54254 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.02□□□□□ -0.17
Atxn1P54254 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Atxn1P54254 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atxn1P54254 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC14.02□□□□□ -0.17
Atxn1P54254 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atxn1P54254 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Atxn1P54254 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atxn1P54254 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atxn1P54254 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atxn1P54254 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atxn1P54254 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atxn1P54254 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Atxn1P54254 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atxn1P54254 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atxn1P54254 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Atxn1P54254 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atxn1P54254 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Atxn1P54254 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Atxn1P54254 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atxn1P54254 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atxn1P54254 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atxn1P54254 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atxn1P54254 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Atxn1P54254 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.01□□□□□ -0.17
Atxn1P54254 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Atxn1P54254 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Atxn1P54254 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Atxn1P54254 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Atxn1P54254 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Atxn1P54254 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Atxn1P54254 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC14.01□□□□□ -0.17
Atxn1P54254 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.01□□□□□ -0.17
Atxn1P54254 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atxn1P54254 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atxn1P54254 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Atxn1P54254 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atxn1P54254 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atxn1P54254 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Atxn1P54254 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atxn1P54254 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atxn1P54254 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Atxn1P54254 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atxn1P54254 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atxn1P54254 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atxn1P54254 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atxn1P54254 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atxn1P54254 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Atxn1P54254 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Atxn1P54254 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Atxn1P54254 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14□□□□□ -0.17
Atxn1P54254 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Atxn1P54254 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms