Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Fdft1P53798 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Fdft1P53798 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fdft1P53798 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.13□□□□□ -0.15
Fdft1P53798 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fdft1P53798 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fdft1P53798 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Fdft1P53798 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Fdft1P53798 Gm18737-201ENSMUST00000173594 937 ntBASIC14.13□□□□□ -0.15
Fdft1P53798 Gm27494-201ENSMUST00000184735 189 ntBASIC14.13□□□□□ -0.15
Fdft1P53798 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.13□□□□□ -0.15
Fdft1P53798 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Fdft1P53798 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Fdft1P53798 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fdft1P53798 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fdft1P53798 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fdft1P53798 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fdft1P53798 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Fdft1P53798 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fdft1P53798 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Fdft1P53798 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Fdft1P53798 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fdft1P53798 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fdft1P53798 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Fdft1P53798 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.13□□□□□ -0.15
Fdft1P53798 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fdft1P53798 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fdft1P53798 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Fdft1P53798 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.13□□□□□ -0.15
Fdft1P53798 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Fdft1P53798 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fdft1P53798 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.12□□□□□ -0.15
Fdft1P53798 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.12□□□□□ -0.15
Fdft1P53798 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fdft1P53798 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Fdft1P53798 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fdft1P53798 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fdft1P53798 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fdft1P53798 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.12□□□□□ -0.15
Fdft1P53798 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fdft1P53798 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.12□□□□□ -0.15
Fdft1P53798 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fdft1P53798 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.12□□□□□ -0.15
Fdft1P53798 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.12□□□□□ -0.15
Fdft1P53798 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.12□□□□□ -0.15
Fdft1P53798 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.12□□□□□ -0.15
Fdft1P53798 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.12□□□□□ -0.15
Fdft1P53798 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fdft1P53798 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Fdft1P53798 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fdft1P53798 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Fdft1P53798 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fdft1P53798 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fdft1P53798 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Fdft1P53798 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Fdft1P53798 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
Fdft1P53798 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Fdft1P53798 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Fdft1P53798 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fdft1P53798 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fdft1P53798 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fdft1P53798 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fdft1P53798 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.12□□□□□ -0.15
Fdft1P53798 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.12□□□□□ -0.15
Fdft1P53798 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Fdft1P53798 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Fdft1P53798 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fdft1P53798 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.11□□□□□ -0.15
Fdft1P53798 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Fdft1P53798 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fdft1P53798 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fdft1P53798 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.11□□□□□ -0.15
Fdft1P53798 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fdft1P53798 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Fdft1P53798 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fdft1P53798 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fdft1P53798 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fdft1P53798 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fdft1P53798 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fdft1P53798 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fdft1P53798 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fdft1P53798 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Fdft1P53798 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Fdft1P53798 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.11□□□□□ -0.15
Fdft1P53798 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.11□□□□□ -0.15
Fdft1P53798 Gm2810-201ENSMUST00000118681 990 ntBASIC14.11□□□□□ -0.15
Fdft1P53798 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Fdft1P53798 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Fdft1P53798 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.11□□□□□ -0.15
Fdft1P53798 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Fdft1P53798 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Fdft1P53798 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.11□□□□□ -0.15
Fdft1P53798 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Fdft1P53798 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.11□□□□□ -0.15
Fdft1P53798 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fdft1P53798 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fdft1P53798 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Fdft1P53798 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fdft1P53798 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fdft1P53798 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms