Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc3P49135 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Ercc3P49135 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc3P49135 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc3P49135 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC16.79■□□□□ 0.28
Ercc3P49135 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc3P49135 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc3P49135 Gm6159-201ENSMUST00000191249 1724 ntBASIC16.79■□□□□ 0.28
Ercc3P49135 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc3P49135 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc3P49135 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Ercc3P49135 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ercc3P49135 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ercc3P49135 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC16.78■□□□□ 0.28
Ercc3P49135 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ercc3P49135 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ercc3P49135 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ercc3P49135 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ercc3P49135 Gm25144-201ENSMUST00000179561 110 ntBASIC16.78■□□□□ 0.28
Ercc3P49135 Gm25352-201ENSMUST00000179815 110 ntBASIC16.78■□□□□ 0.28
Ercc3P49135 Gm6916-202ENSMUST00000205523 195 ntBASIC16.78■□□□□ 0.28
Ercc3P49135 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC16.78■□□□□ 0.28
Ercc3P49135 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC16.78■□□□□ 0.28
Ercc3P49135 Gm7775-201ENSMUST00000218871 853 ntBASIC16.78■□□□□ 0.28
Ercc3P49135 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ercc3P49135 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Ercc3P49135 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Ercc3P49135 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Ercc3P49135 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.78■□□□□ 0.28
Ercc3P49135 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ercc3P49135 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ercc3P49135 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ercc3P49135 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ercc3P49135 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ercc3P49135 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ercc3P49135 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ercc3P49135 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Ercc3P49135 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ercc3P49135 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC16.77■□□□□ 0.28
Ercc3P49135 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.77■□□□□ 0.28
Ercc3P49135 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ercc3P49135 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ercc3P49135 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ercc3P49135 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ercc3P49135 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Ercc3P49135 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ercc3P49135 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ercc3P49135 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.77■□□□□ 0.28
Ercc3P49135 Gm43703-201ENSMUST00000200523 763 ntBASIC16.77■□□□□ 0.28
Ercc3P49135 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ercc3P49135 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
Ercc3P49135 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ercc3P49135 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ercc3P49135 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC16.77■□□□□ 0.27
Ercc3P49135 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ercc3P49135 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ercc3P49135 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ercc3P49135 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ercc3P49135 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Ercc3P49135 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc3P49135 AC115735.4-201ENSMUST00000227460 1944 ntBASIC16.76■□□□□ 0.27
Ercc3P49135 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Ercc3P49135 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc3P49135 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
Ercc3P49135 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc3P49135 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Ercc3P49135 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc3P49135 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc3P49135 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc3P49135 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc3P49135 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc3P49135 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Ercc3P49135 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Ercc3P49135 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc3P49135 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.76■□□□□ 0.27
Ercc3P49135 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc3P49135 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc3P49135 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc3P49135 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc3P49135 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc3P49135 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Ercc3P49135 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ercc3P49135 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ercc3P49135 Gm5320-201ENSMUST00000207163 1519 ntBASIC16.75■□□□□ 0.27
Ercc3P49135 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ercc3P49135 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ercc3P49135 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ercc3P49135 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ercc3P49135 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ercc3P49135 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ercc3P49135 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ercc3P49135 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ercc3P49135 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.75■□□□□ 0.27
Ercc3P49135 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC16.75■□□□□ 0.27
Ercc3P49135 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ercc3P49135 Gm14057-201ENSMUST00000120631 482 ntBASIC16.75■□□□□ 0.27
Ercc3P49135 Gm15487-201ENSMUST00000122373 465 ntBASIC16.75■□□□□ 0.27
Ercc3P49135 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC16.75■□□□□ 0.27
Ercc3P49135 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Ercc3P49135 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms