Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Sox18P43680 Gm2451-201ENSMUST00000199447 999 ntBASIC13.57□□□□□ -0.24
Sox18P43680 Gm10290-201ENSMUST00000200451 999 ntBASIC13.57□□□□□ -0.24
Sox18P43680 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.57□□□□□ -0.24
Sox18P43680 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.57□□□□□ -0.24
Sox18P43680 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox18P43680 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC13.57□□□□□ -0.24
Sox18P43680 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.57□□□□□ -0.24
Sox18P43680 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox18P43680 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.57□□□□□ -0.24
Sox18P43680 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox18P43680 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox18P43680 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Sox18P43680 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Sox18P43680 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox18P43680 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox18P43680 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox18P43680 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox18P43680 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Sox18P43680 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox18P43680 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Sox18P43680 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox18P43680 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox18P43680 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox18P43680 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox18P43680 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox18P43680 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox18P43680 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Sox18P43680 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox18P43680 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox18P43680 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.56□□□□□ -0.24
Sox18P43680 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox18P43680 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox18P43680 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox18P43680 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.56□□□□□ -0.24
Sox18P43680 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox18P43680 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.56□□□□□ -0.24
Sox18P43680 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox18P43680 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox18P43680 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox18P43680 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox18P43680 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.56□□□□□ -0.24
Sox18P43680 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
Sox18P43680 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Sox18P43680 Gm36943-201ENSMUST00000194422 282 ntBASIC13.56□□□□□ -0.24
Sox18P43680 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC13.56□□□□□ -0.24
Sox18P43680 Gm8463-201ENSMUST00000208573 613 ntBASIC13.56□□□□□ -0.24
Sox18P43680 AC132446.1-201ENSMUST00000222655 226 ntBASIC13.56□□□□□ -0.24
Sox18P43680 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Sox18P43680 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox18P43680 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox18P43680 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Sox18P43680 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Sox18P43680 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox18P43680 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.56□□□□□ -0.24
Sox18P43680 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Sox18P43680 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Sox18P43680 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox18P43680 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox18P43680 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox18P43680 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox18P43680 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox18P43680 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox18P43680 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox18P43680 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox18P43680 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox18P43680 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox18P43680 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.55□□□□□ -0.24
Sox18P43680 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox18P43680 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox18P43680 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox18P43680 BC001981-202ENSMUST00000191393 1545 ntBASIC13.55□□□□□ -0.24
Sox18P43680 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox18P43680 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
Sox18P43680 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox18P43680 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox18P43680 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox18P43680 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sox18P43680 Gm15236-201ENSMUST00000117309 379 ntBASIC13.55□□□□□ -0.24
Sox18P43680 Gm15626-201ENSMUST00000117478 868 ntBASIC13.55□□□□□ -0.24
Sox18P43680 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.55□□□□□ -0.24
Sox18P43680 Gm16570-201ENSMUST00000161951 436 ntBASIC13.55□□□□□ -0.24
Sox18P43680 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.55□□□□□ -0.24
Sox18P43680 Gm27847-201ENSMUST00000183711 107 ntBASIC13.55□□□□□ -0.24
Sox18P43680 Gm27375-201ENSMUST00000183799 107 ntBASIC13.55□□□□□ -0.24
Sox18P43680 Gm27243-201ENSMUST00000183964 521 ntBASIC13.55□□□□□ -0.24
Sox18P43680 Gm29127-201ENSMUST00000188304 517 ntBASIC13.55□□□□□ -0.24
Sox18P43680 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sox18P43680 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.55□□□□□ -0.24
Sox18P43680 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox18P43680 Gm6091-201ENSMUST00000098307 165 ntBASIC13.55□□□□□ -0.24
Sox18P43680 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Sox18P43680 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox18P43680 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sox18P43680 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.55□□□□□ -0.24
Sox18P43680 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox18P43680 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox18P43680 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox18P43680 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Sox18P43680 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms