Protein–RNA interactions for Protein: P41230

Kdm5c, Lysine-specific demethylase 5C, mousemouse

Predictions only

Length 1,554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm5cP41230 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC20.13■□□□□ 0.81
Kdm5cP41230 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Kdm5cP41230 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Kdm5cP41230 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC20.13■□□□□ 0.81
Kdm5cP41230 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Kdm5cP41230 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Kdm5cP41230 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Kdm5cP41230 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Kdm5cP41230 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Kdm5cP41230 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC20.13■□□□□ 0.81
Kdm5cP41230 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Kdm5cP41230 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Kdm5cP41230 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Kdm5cP41230 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Kdm5cP41230 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Kdm5cP41230 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Kdm5cP41230 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Kdm5cP41230 Gm11591-201ENSMUST00000120063 702 ntBASIC20.12■□□□□ 0.81
Kdm5cP41230 Gm14381-201ENSMUST00000122105 414 ntBASIC20.12■□□□□ 0.81
Kdm5cP41230 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC20.12■□□□□ 0.81
Kdm5cP41230 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Kdm5cP41230 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Kdm5cP41230 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Kdm5cP41230 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Kdm5cP41230 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Kdm5cP41230 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Kdm5cP41230 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC20.12■□□□□ 0.81
Kdm5cP41230 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Kdm5cP41230 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Kdm5cP41230 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Kdm5cP41230 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Kdm5cP41230 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Kdm5cP41230 Gm18630-201ENSMUST00000222109 1397 ntBASIC20.12■□□□□ 0.81
Kdm5cP41230 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Kdm5cP41230 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC20.12■□□□□ 0.81
Kdm5cP41230 Gm13297-201ENSMUST00000120205 934 ntBASIC20.12■□□□□ 0.81
Kdm5cP41230 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC20.12■□□□□ 0.81
Kdm5cP41230 Gm20482-202ENSMUST00000174729 825 ntBASIC20.12■□□□□ 0.81
Kdm5cP41230 Rps4l-202ENSMUST00000204242 789 ntBASIC20.12■□□□□ 0.81
Kdm5cP41230 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC20.12■□□□□ 0.81
Kdm5cP41230 Gm6082-201ENSMUST00000215204 454 ntBASIC20.12■□□□□ 0.81
Kdm5cP41230 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Kdm5cP41230 Mir433-201ENSMUST00000093564 124 ntBASIC20.12■□□□□ 0.81
Kdm5cP41230 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Kdm5cP41230 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Kdm5cP41230 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Kdm5cP41230 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.11■□□□□ 0.81
Kdm5cP41230 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Kdm5cP41230 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Kdm5cP41230 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Kdm5cP41230 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Kdm5cP41230 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Kdm5cP41230 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Kdm5cP41230 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Kdm5cP41230 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Kdm5cP41230 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Kdm5cP41230 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Kdm5cP41230 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Kdm5cP41230 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Kdm5cP41230 Gm4986-201ENSMUST00000119731 549 ntBASIC20.11■□□□□ 0.81
Kdm5cP41230 Gm7809-201ENSMUST00000153199 742 ntBASIC20.11■□□□□ 0.81
Kdm5cP41230 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC20.11■□□□□ 0.81
Kdm5cP41230 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC20.11■□□□□ 0.81
Kdm5cP41230 Mir5132-201ENSMUST00000175166 71 ntBASIC20.11■□□□□ 0.81
Kdm5cP41230 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC20.11■□□□□ 0.81
Kdm5cP41230 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Kdm5cP41230 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Kdm5cP41230 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Kdm5cP41230 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Kdm5cP41230 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC20.11■□□□□ 0.81
Kdm5cP41230 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Kdm5cP41230 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Kdm5cP41230 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Kdm5cP41230 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.11■□□□□ 0.81
Kdm5cP41230 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Kdm5cP41230 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Kdm5cP41230 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Kdm5cP41230 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Kdm5cP41230 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Kdm5cP41230 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Kdm5cP41230 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC20.1■□□□□ 0.81
Kdm5cP41230 Gm11960-202ENSMUST00000181063 2858 ntBASIC20.1■□□□□ 0.81
Kdm5cP41230 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Kdm5cP41230 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Kdm5cP41230 Gm11964-201ENSMUST00000120982 444 ntBASIC20.1■□□□□ 0.81
Kdm5cP41230 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Kdm5cP41230 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC20.1■□□□□ 0.81
Kdm5cP41230 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC20.1■□□□□ 0.81
Kdm5cP41230 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Kdm5cP41230 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC20.1■□□□□ 0.81
Kdm5cP41230 Gm5363-201ENSMUST00000211927 938 ntBASIC20.1■□□□□ 0.81
Kdm5cP41230 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Kdm5cP41230 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Kdm5cP41230 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Kdm5cP41230 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Kdm5cP41230 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Kdm5cP41230 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Kdm5cP41230 Gm37728-201ENSMUST00000195025 2292 ntBASIC20.1■□□□□ 0.81
Kdm5cP41230 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Kdm5cP41230 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms