Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox6P40645 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.29□□□□□ -0.28
Sox6P40645 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox6P40645 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox6P40645 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox6P40645 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Sox6P40645 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox6P40645 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sox6P40645 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sox6P40645 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox6P40645 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.29□□□□□ -0.28
Sox6P40645 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox6P40645 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox6P40645 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Sox6P40645 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Sox6P40645 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sox6P40645 Gm11594-201ENSMUST00000122313 162 ntBASIC13.29□□□□□ -0.28
Sox6P40645 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.29□□□□□ -0.28
Sox6P40645 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sox6P40645 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox6P40645 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox6P40645 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Sox6P40645 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox6P40645 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sox6P40645 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Sox6P40645 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Sox6P40645 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Sox6P40645 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.29□□□□□ -0.28
Sox6P40645 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox6P40645 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Sox6P40645 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox6P40645 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sox6P40645 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sox6P40645 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox6P40645 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox6P40645 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox6P40645 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox6P40645 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox6P40645 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox6P40645 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Sox6P40645 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox6P40645 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox6P40645 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox6P40645 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox6P40645 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Sox6P40645 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox6P40645 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.28□□□□□ -0.28
Sox6P40645 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.28□□□□□ -0.28
Sox6P40645 Gm15427-201ENSMUST00000117288 531 ntBASIC13.28□□□□□ -0.28
Sox6P40645 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.28□□□□□ -0.28
Sox6P40645 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox6P40645 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.28□□□□□ -0.28
Sox6P40645 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Sox6P40645 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.28□□□□□ -0.28
Sox6P40645 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox6P40645 Gm10175-201ENSMUST00000086013 645 ntBASIC13.28□□□□□ -0.28
Sox6P40645 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.28□□□□□ -0.28
Sox6P40645 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sox6P40645 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox6P40645 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox6P40645 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.28□□□□□ -0.28
Sox6P40645 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sox6P40645 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox6P40645 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox6P40645 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox6P40645 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox6P40645 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox6P40645 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.28□□□□□ -0.28
Sox6P40645 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sox6P40645 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sox6P40645 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sox6P40645 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sox6P40645 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Sox6P40645 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sox6P40645 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Sox6P40645 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sox6P40645 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.27□□□□□ -0.29
Sox6P40645 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.27□□□□□ -0.29
Sox6P40645 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.27□□□□□ -0.29
Sox6P40645 Gm16026-204ENSMUST00000162652 683 ntBASIC13.27□□□□□ -0.29
Sox6P40645 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.27□□□□□ -0.29
Sox6P40645 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.27□□□□□ -0.29
Sox6P40645 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox6P40645 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox6P40645 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox6P40645 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox6P40645 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox6P40645 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Sox6P40645 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sox6P40645 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox6P40645 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox6P40645 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox6P40645 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox6P40645 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.27□□□□□ -0.29
Sox6P40645 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox6P40645 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Sox6P40645 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox6P40645 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox6P40645 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox6P40645 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms