Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Timp3P39876 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Timp3P39876 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Timp3P39876 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Timp3P39876 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Timp3P39876 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Timp3P39876 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Timp3P39876 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Timp3P39876 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Timp3P39876 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Timp3P39876 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.61□□□□□ -0.55
Timp3P39876 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Timp3P39876 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.61□□□□□ -0.55
Timp3P39876 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Timp3P39876 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
Timp3P39876 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Timp3P39876 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Timp3P39876 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Timp3P39876 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Timp3P39876 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Timp3P39876 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Timp3P39876 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC11.61□□□□□ -0.55
Timp3P39876 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Timp3P39876 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Timp3P39876 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.61□□□□□ -0.55
Timp3P39876 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.61□□□□□ -0.55
Timp3P39876 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC11.61□□□□□ -0.55
Timp3P39876 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.61□□□□□ -0.55
Timp3P39876 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Timp3P39876 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Timp3P39876 Gm27533-201ENSMUST00000183800 152 ntBASIC11.61□□□□□ -0.55
Timp3P39876 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Timp3P39876 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.61□□□□□ -0.55
Timp3P39876 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Timp3P39876 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Timp3P39876 AC090659.2-201ENSMUST00000225378 1186 ntBASIC11.61□□□□□ -0.55
Timp3P39876 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Timp3P39876 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Timp3P39876 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Timp3P39876 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Timp3P39876 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Timp3P39876 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Timp3P39876 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC11.61□□□□□ -0.55
Timp3P39876 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Timp3P39876 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Timp3P39876 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Timp3P39876 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Timp3P39876 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Timp3P39876 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Timp3P39876 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Timp3P39876 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Timp3P39876 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Timp3P39876 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Timp3P39876 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Timp3P39876 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Timp3P39876 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Timp3P39876 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Timp3P39876 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Timp3P39876 AC166574.6-201ENSMUST00000227889 1806 ntBASIC11.6□□□□□ -0.55
Timp3P39876 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Timp3P39876 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Timp3P39876 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Timp3P39876 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.6□□□□□ -0.55
Timp3P39876 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Timp3P39876 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Timp3P39876 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Timp3P39876 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Timp3P39876 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Timp3P39876 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Timp3P39876 Gm13127-201ENSMUST00000118978 1389 ntBASIC11.6□□□□□ -0.55
Timp3P39876 Gm24543-201ENSMUST00000103867 82 ntBASIC11.6□□□□□ -0.55
Timp3P39876 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Timp3P39876 Gm12151-201ENSMUST00000121374 290 ntBASIC11.6□□□□□ -0.55
Timp3P39876 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.6□□□□□ -0.55
Timp3P39876 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.6□□□□□ -0.55
Timp3P39876 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.6□□□□□ -0.55
Timp3P39876 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Timp3P39876 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC11.6□□□□□ -0.55
Timp3P39876 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC11.6□□□□□ -0.55
Timp3P39876 Gm44344-201ENSMUST00000200287 129 ntBASIC11.6□□□□□ -0.55
Timp3P39876 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC11.6□□□□□ -0.55
Timp3P39876 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Timp3P39876 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.6□□□□□ -0.55
Timp3P39876 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Timp3P39876 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Timp3P39876 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Timp3P39876 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Timp3P39876 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Timp3P39876 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
Timp3P39876 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC11.6□□□□□ -0.55
Timp3P39876 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Timp3P39876 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Timp3P39876 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Timp3P39876 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Timp3P39876 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Timp3P39876 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Timp3P39876 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC11.59□□□□□ -0.55
Timp3P39876 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Timp3P39876 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Timp3P39876 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms