Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Cdh4P39038 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdh4P39038 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh4P39038 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh4P39038 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh4P39038 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Cdh4P39038 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh4P39038 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh4P39038 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh4P39038 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Cdh4P39038 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh4P39038 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Cdh4P39038 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cdh4P39038 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Cdh4P39038 Gm15957-201ENSMUST00000118893 974 ntBASIC13.54□□□□□ -0.24
Cdh4P39038 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.54□□□□□ -0.24
Cdh4P39038 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.54□□□□□ -0.24
Cdh4P39038 Gm44344-201ENSMUST00000200287 129 ntBASIC13.54□□□□□ -0.24
Cdh4P39038 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.54□□□□□ -0.24
Cdh4P39038 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.54□□□□□ -0.24
Cdh4P39038 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh4P39038 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh4P39038 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cdh4P39038 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
Cdh4P39038 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.54□□□□□ -0.24
Cdh4P39038 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh4P39038 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh4P39038 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh4P39038 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.54□□□□□ -0.24
Cdh4P39038 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh4P39038 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Cdh4P39038 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.54□□□□□ -0.24
Cdh4P39038 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh4P39038 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.54□□□□□ -0.24
Cdh4P39038 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cdh4P39038 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh4P39038 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh4P39038 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh4P39038 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.54□□□□□ -0.24
Cdh4P39038 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh4P39038 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh4P39038 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Cdh4P39038 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh4P39038 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Cdh4P39038 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh4P39038 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.53□□□□□ -0.24
Cdh4P39038 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Cdh4P39038 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh4P39038 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh4P39038 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cdh4P39038 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh4P39038 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh4P39038 Mir7023-201ENSMUST00000185093 64 ntBASIC13.53□□□□□ -0.24
Cdh4P39038 Gm10576-201ENSMUST00000191927 825 ntBASIC13.53□□□□□ -0.24
Cdh4P39038 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh4P39038 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.53□□□□□ -0.24
Cdh4P39038 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh4P39038 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cdh4P39038 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh4P39038 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh4P39038 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cdh4P39038 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.53□□□□□ -0.24
Cdh4P39038 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Cdh4P39038 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh4P39038 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh4P39038 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cdh4P39038 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdh4P39038 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdh4P39038 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cdh4P39038 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdh4P39038 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.52□□□□□ -0.24
Cdh4P39038 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdh4P39038 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh4P39038 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Cdh4P39038 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Cdh4P39038 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh4P39038 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh4P39038 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.52□□□□□ -0.25
Cdh4P39038 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh4P39038 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Cdh4P39038 Auts2-212ENSMUST00000178555 309 ntBASIC13.52□□□□□ -0.25
Cdh4P39038 Gm27680-201ENSMUST00000184192 160 ntBASIC13.52□□□□□ -0.25
Cdh4P39038 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh4P39038 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Cdh4P39038 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh4P39038 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.52□□□□□ -0.25
Cdh4P39038 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh4P39038 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh4P39038 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh4P39038 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh4P39038 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh4P39038 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
Cdh4P39038 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh4P39038 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh4P39038 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Cdh4P39038 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh4P39038 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh4P39038 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh4P39038 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh4P39038 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 92.1 ms