Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vcam1P29533 AC114008.2-201ENSMUST00000227699 1347 ntBASIC16.17■□□□□ 0.18
Vcam1P29533 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vcam1P29533 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vcam1P29533 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vcam1P29533 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC16.16■□□□□ 0.18
Vcam1P29533 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vcam1P29533 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
Vcam1P29533 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Vcam1P29533 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vcam1P29533 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vcam1P29533 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Vcam1P29533 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vcam1P29533 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vcam1P29533 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Vcam1P29533 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vcam1P29533 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vcam1P29533 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vcam1P29533 Gm4984-201ENSMUST00000115987 360 ntBASIC16.16■□□□□ 0.18
Vcam1P29533 Gm16342-201ENSMUST00000124025 1025 ntBASIC16.16■□□□□ 0.18
Vcam1P29533 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Vcam1P29533 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC16.16■□□□□ 0.18
Vcam1P29533 Gm5276-201ENSMUST00000196683 1047 ntBASIC16.16■□□□□ 0.18
Vcam1P29533 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC16.16■□□□□ 0.18
Vcam1P29533 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Vcam1P29533 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC16.16■□□□□ 0.18
Vcam1P29533 Gm17794-201ENSMUST00000220252 955 ntBASIC16.16■□□□□ 0.18
Vcam1P29533 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vcam1P29533 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC16.16■□□□□ 0.18
Vcam1P29533 AC125350.2-201ENSMUST00000224737 727 ntBASIC16.16■□□□□ 0.18
Vcam1P29533 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vcam1P29533 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Vcam1P29533 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vcam1P29533 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vcam1P29533 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vcam1P29533 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Vcam1P29533 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vcam1P29533 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vcam1P29533 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vcam1P29533 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vcam1P29533 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC16.16■□□□□ 0.18
Vcam1P29533 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vcam1P29533 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vcam1P29533 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Vcam1P29533 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vcam1P29533 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vcam1P29533 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vcam1P29533 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vcam1P29533 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Vcam1P29533 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vcam1P29533 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vcam1P29533 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vcam1P29533 Gm9816-201ENSMUST00000122292 1414 ntBASIC16.15■□□□□ 0.18
Vcam1P29533 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vcam1P29533 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC16.15■□□□□ 0.18
Vcam1P29533 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Vcam1P29533 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vcam1P29533 Gm44799-201ENSMUST00000207639 1202 ntBASIC16.15■□□□□ 0.18
Vcam1P29533 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC16.15■□□□□ 0.18
Vcam1P29533 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vcam1P29533 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC16.15■□□□□ 0.18
Vcam1P29533 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Vcam1P29533 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vcam1P29533 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vcam1P29533 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.15■□□□□ 0.18
Vcam1P29533 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Vcam1P29533 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vcam1P29533 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vcam1P29533 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Vcam1P29533 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vcam1P29533 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vcam1P29533 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Vcam1P29533 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vcam1P29533 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vcam1P29533 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vcam1P29533 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vcam1P29533 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vcam1P29533 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vcam1P29533 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vcam1P29533 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vcam1P29533 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vcam1P29533 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vcam1P29533 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vcam1P29533 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vcam1P29533 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Vcam1P29533 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vcam1P29533 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC16.14■□□□□ 0.17
Vcam1P29533 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC16.14■□□□□ 0.17
Vcam1P29533 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vcam1P29533 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC16.14■□□□□ 0.17
Vcam1P29533 Gm6983-201ENSMUST00000214912 628 ntBASIC16.14■□□□□ 0.17
Vcam1P29533 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vcam1P29533 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vcam1P29533 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Vcam1P29533 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vcam1P29533 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vcam1P29533 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vcam1P29533 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vcam1P29533 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vcam1P29533 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms