Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RxrbP28704 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RxrbP28704 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
RxrbP28704 Mir5126-201ENSMUST00000175513 77 ntBASIC14.2□□□□□ -0.14
RxrbP28704 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RxrbP28704 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RxrbP28704 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RxrbP28704 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RxrbP28704 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.2□□□□□ -0.14
RxrbP28704 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.2□□□□□ -0.14
RxrbP28704 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.2□□□□□ -0.14
RxrbP28704 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RxrbP28704 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
RxrbP28704 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RxrbP28704 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RxrbP28704 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RxrbP28704 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.2□□□□□ -0.14
RxrbP28704 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RxrbP28704 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RxrbP28704 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RxrbP28704 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RxrbP28704 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
RxrbP28704 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RxrbP28704 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RxrbP28704 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
RxrbP28704 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.19□□□□□ -0.14
RxrbP28704 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
RxrbP28704 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
RxrbP28704 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RxrbP28704 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.19□□□□□ -0.14
RxrbP28704 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RxrbP28704 Gm27300-201ENSMUST00000184085 97 ntBASIC14.19□□□□□ -0.14
RxrbP28704 Gm27335-201ENSMUST00000184758 97 ntBASIC14.19□□□□□ -0.14
RxrbP28704 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.19□□□□□ -0.14
RxrbP28704 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RxrbP28704 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RxrbP28704 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
RxrbP28704 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RxrbP28704 Gm10819-201ENSMUST00000099988 561 ntBASIC14.19□□□□□ -0.14
RxrbP28704 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RxrbP28704 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RxrbP28704 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RxrbP28704 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RxrbP28704 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
RxrbP28704 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.19□□□□□ -0.14
RxrbP28704 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RxrbP28704 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RxrbP28704 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.19□□□□□ -0.14
RxrbP28704 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RxrbP28704 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
RxrbP28704 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RxrbP28704 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RxrbP28704 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RxrbP28704 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RxrbP28704 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RxrbP28704 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RxrbP28704 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RxrbP28704 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.18□□□□□ -0.14
RxrbP28704 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.18□□□□□ -0.14
RxrbP28704 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.18□□□□□ -0.14
RxrbP28704 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RxrbP28704 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.18□□□□□ -0.14
RxrbP28704 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.18□□□□□ -0.14
RxrbP28704 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.18□□□□□ -0.14
RxrbP28704 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.18□□□□□ -0.14
RxrbP28704 Gm15590-201ENSMUST00000078419 552 ntBASIC14.18□□□□□ -0.14
RxrbP28704 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RxrbP28704 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.18□□□□□ -0.14
RxrbP28704 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RxrbP28704 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RxrbP28704 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RxrbP28704 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RxrbP28704 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RxrbP28704 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.18□□□□□ -0.14
RxrbP28704 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
RxrbP28704 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RxrbP28704 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RxrbP28704 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RxrbP28704 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RxrbP28704 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RxrbP28704 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.17□□□□□ -0.14
RxrbP28704 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.17□□□□□ -0.14
RxrbP28704 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.17□□□□□ -0.14
RxrbP28704 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RxrbP28704 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RxrbP28704 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RxrbP28704 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RxrbP28704 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RxrbP28704 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RxrbP28704 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RxrbP28704 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RxrbP28704 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RxrbP28704 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RxrbP28704 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.17□□□□□ -0.14
RxrbP28704 Gm27628-201ENSMUST00000184911 107 ntBASIC14.17□□□□□ -0.14
RxrbP28704 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.17□□□□□ -0.14
RxrbP28704 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.17□□□□□ -0.14
RxrbP28704 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RxrbP28704 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RxrbP28704 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms