Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nckap1P28660 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nckap1P28660 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nckap1P28660 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.07□□□□□ -0.16
Nckap1P28660 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nckap1P28660 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nckap1P28660 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nckap1P28660 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.06□□□□□ -0.16
Nckap1P28660 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.06□□□□□ -0.16
Nckap1P28660 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Nckap1P28660 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nckap1P28660 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Nckap1P28660 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Nckap1P28660 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nckap1P28660 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nckap1P28660 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Nckap1P28660 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
Nckap1P28660 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.06□□□□□ -0.16
Nckap1P28660 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.06□□□□□ -0.16
Nckap1P28660 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.06□□□□□ -0.16
Nckap1P28660 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.06□□□□□ -0.16
Nckap1P28660 Gm9908-201ENSMUST00000211534 448 ntBASIC14.06□□□□□ -0.16
Nckap1P28660 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nckap1P28660 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.06□□□□□ -0.16
Nckap1P28660 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.06□□□□□ -0.16
Nckap1P28660 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nckap1P28660 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.06□□□□□ -0.16
Nckap1P28660 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nckap1P28660 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Nckap1P28660 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nckap1P28660 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nckap1P28660 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nckap1P28660 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nckap1P28660 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nckap1P28660 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nckap1P28660 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nckap1P28660 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Nckap1P28660 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nckap1P28660 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nckap1P28660 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nckap1P28660 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nckap1P28660 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nckap1P28660 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nckap1P28660 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nckap1P28660 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nckap1P28660 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.05□□□□□ -0.16
Nckap1P28660 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nckap1P28660 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nckap1P28660 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nckap1P28660 Gm14127-201ENSMUST00000117906 678 ntBASIC14.05□□□□□ -0.16
Nckap1P28660 Gm18187-201ENSMUST00000196476 984 ntBASIC14.05□□□□□ -0.16
Nckap1P28660 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.05□□□□□ -0.16
Nckap1P28660 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.05□□□□□ -0.16
Nckap1P28660 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nckap1P28660 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Nckap1P28660 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nckap1P28660 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nckap1P28660 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nckap1P28660 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nckap1P28660 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Nckap1P28660 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Nckap1P28660 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nckap1P28660 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Nckap1P28660 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nckap1P28660 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nckap1P28660 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Nckap1P28660 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nckap1P28660 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.05□□□□□ -0.16
Nckap1P28660 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nckap1P28660 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nckap1P28660 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nckap1P28660 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Nckap1P28660 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nckap1P28660 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nckap1P28660 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Nckap1P28660 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.04□□□□□ -0.16
Nckap1P28660 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nckap1P28660 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.04□□□□□ -0.16
Nckap1P28660 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Nckap1P28660 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nckap1P28660 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Nckap1P28660 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.04□□□□□ -0.16
Nckap1P28660 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nckap1P28660 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nckap1P28660 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nckap1P28660 Gm44608-201ENSMUST00000206827 855 ntBASIC14.04□□□□□ -0.16
Nckap1P28660 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Nckap1P28660 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.04□□□□□ -0.16
Nckap1P28660 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nckap1P28660 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nckap1P28660 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nckap1P28660 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nckap1P28660 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.04□□□□□ -0.16
Nckap1P28660 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Nckap1P28660 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nckap1P28660 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nckap1P28660 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.04□□□□□ -0.16
Nckap1P28660 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nckap1P28660 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nckap1P28660 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms